RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 DDX11Q96FC9 970 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 SHDQ96IW2 340 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 TOX2Q96NM4 488 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 DEPDC7Q96QD5 511 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 DNAJC7Q99615 494 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 ZKSCAN3Q9BRR0 538 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 FTOQ9C0B1 505 aaKnown RBP eCLIP4.74□□□□□ -1.65
COPS7B-220ENST00000479430 UBE2ZQ9H832 354 aaPredicted RBP4.74□□□□□ -1.65
COPS7B-220ENST00000479430 ARMT1Q9H993 441 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 HOXC10Q9NYD6 342 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 PRKAG3Q9UGI9 489 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 FAM184BQ9ULE4 1060 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 PPM1HQ9ULR3 514 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 CNPY2Q9Y2B0 182 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 PCDHA11Q9Y5I1 949 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 PLXNA4Q9HCM2 1894 aa4.74□□□□□ -1.65
COPS7B-220ENST00000479430 ZNF521Q96K83 1311 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 DCHS1Q96JQ0 3298 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 ZFHX2Q9C0A1 2572 aaPredicted RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 PRR33A8MZF0 331 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 VWA5AO00534 786 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 ENPP3O14638 875 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 TLR3O15455 904 aaKnown RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 MYL3P08590 195 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 RARAP10276 462 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 IBSPP21815 317 aaPredicted RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 GJA9P57773 515 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 LMNB2Q03252 620 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 ICA1Q05084 483 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 GABPAQ06546 454 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 G3BP1Q13283 466 aaKnown RBP eCLIP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 OS9Q13438 667 aaPredicted RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 SEZ6Q53EL9 994 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 TNNI3KQ59H18 835 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 FAM47CQ5HY64 1035 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 RNF187Q5TA31 235 aaPredicted RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 TTBK2Q6IQ55 1244 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 BNC2Q6ZN30 1099 aaPredicted RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 ARMCX2Q7L311 632 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 RIOX2Q8IUF8 465 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 SLITRK4Q8IW52 837 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 SHCBP1Q8NEM2 672 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 MICAL1Q8TDZ2 1067 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 KIFC2Q96AC6 838 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 PLD4Q96BZ4 506 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 HHIPQ96QV1 700 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 C17orf80Q9BSJ5 609 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 SRRTQ9BXP5 876 aaKnown RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 KATNBL1Q9H079 304 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 CRISPLD1Q9H336 500 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 MROH8Q9H579 483 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 SUGCTQ9HAC7 445 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 DZANK1Q9NVP4 752 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 MUTYHQ9UIF7 546 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 DBNLQ9UJU6 430 aaKnown RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 RALYQ9UKM9 306 aaKnown RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 ZNF214Q9UL59 606 aaPredicted RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 STRIP2Q9ULQ0 834 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 ISY1Q9ULR0 285 aaKnown RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 NOP58Q9Y2X3 529 aaKnown RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 R3HCC1Q9Y3T6 440 aaKnown RBP4.73□□□□□ -1.65
COPS7B-220ENST00000479430 PCDHB5Q9Y5E4 795 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 FPGT-TNNI3KV9GXZ4 949 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 CACNA1GO43497 2377 aa4.73□□□□□ -1.65
COPS7B-220ENST00000479430 PDS5AQ29RF7 1337 aaKnown RBP4.72□□□□□ -1.65
COPS7B-220ENST00000479430 TTLL8A6PVC2 850 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 ENC1O14682 589 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 LINC01565O15544 149 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 DUSP11O75319 330 aaKnown RBP4.72□□□□□ -1.65
COPS7B-220ENST00000479430 F13A1P00488 732 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 PDGFBP01127 241 aaPredicted RBP4.72□□□□□ -1.65
COPS7B-220ENST00000479430 F11P03951 625 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 UQCRFS1P1P0C7P4 283 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 SP100P23497 879 aaPredicted RBP4.72□□□□□ -1.65
COPS7B-220ENST00000479430 CDK8P49336 464 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 VCPP55072 806 aaKnown RBP4.72□□□□□ -1.65
COPS7B-220ENST00000479430 ANAPC15P60006 121 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 TNFAIP2Q03169 654 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 DLX2Q07687 328 aaPredicted RBP4.72□□□□□ -1.65
COPS7B-220ENST00000479430 TCF15Q12870 199 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 COL9A2Q14055 689 aaPredicted RBP4.72□□□□□ -1.65
COPS7B-220ENST00000479430 GPNMBQ14956 572 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 AAK1Q2M2I8 961 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 CCDC174Q6PII3 467 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 AGMOQ6ZNB7 445 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 TRIM67Q6ZTA4 783 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 TLK2Q86UE8 772 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 NLRP8Q86W28 1048 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 HERC6Q8IVU3 1022 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 LRRC47Q8N1G4 583 aaKnown RBP4.72□□□□□ -1.65
COPS7B-220ENST00000479430 ANKRD35Q8N283 1001 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 PGBD3Q8N328 593 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 CEP120Q8N960 986 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 EAF2Q96CJ1 260 aaPredicted RBP4.72□□□□□ -1.65
COPS7B-220ENST00000479430 RIOK1Q9BRS2 568 aaKnown RBP4.72□□□□□ -1.65
COPS7B-220ENST00000479430 UPF3AQ9H1J1 476 aaKnown RBP4.72□□□□□ -1.65
COPS7B-220ENST00000479430 IGFLR1Q9H665 355 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 VCPKMTQ9H867 229 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 IL1RAPL2Q9NP60 686 aa4.72□□□□□ -1.65
COPS7B-220ENST00000479430 FANCLQ9NW38 375 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms