RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 RASGRP4Q8TDF6 673 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 IGDCC4Q8TDY8 1250 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 LZTS2Q9BRK4 669 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 ERVK-5Q9HDB9 667 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 RGS18Q9NS28 235 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 LZTS1Q9Y250 596 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 NR2E1Q9Y466 385 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 FNDC1Q4ZHG4 1894 aaPredicted RBP19.66■□□□□ 0.74
VIM-204ENST00000478746 MYO10Q9HD67 2058 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 SPDYE3A6NKU9 549 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 E7EWF7 191 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 HOXB8P17481 243 aaPredicted RBP19.65■□□□□ 0.74
VIM-204ENST00000478746 KLRC1P26715 233 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 APOBRQ0VD83 1088 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 UBE2SQ16763 222 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 LLGL2Q6P1M3 1020 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 ASCL5Q7RTU5 278 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 MRPS27Q92552 414 aaKnown RBP19.65■□□□□ 0.74
VIM-204ENST00000478746 CDHR5Q9HBB8 845 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 TSHZ2Q9NRE2 1034 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 HCSTQ9UBK5 93 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 PCDHA6Q9UN73 950 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 NOC2LQ9Y3T9 749 aaKnown RBP19.65■□□□□ 0.74
VIM-204ENST00000478746 PCDHA8Q9Y5H6 950 aa19.65■□□□□ 0.74
VIM-204ENST00000478746 RIF1Q5UIP0 2472 aaKnown RBP19.65■□□□□ 0.74
VIM-204ENST00000478746 C9IYK1 514 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 GPR182O15218 404 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 LAG3P18627 525 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 GNAQP50148 359 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 ACTR2P61160 394 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 UBALD2Q8IYN6 164 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 ZNF654Q8IZM8 581 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 TCF25Q9BQ70 676 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 SDF4Q9BRK5 362 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 MYL10Q9BUA6 226 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 CWH43Q9H720 699 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 ATP6V0A4Q9HBG4 840 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 ENTPD7Q9NQZ7 604 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 KCNH7Q9NS40 1196 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 ST3GAL5Q9UNP4 418 aa19.64■□□□□ 0.73
VIM-204ENST00000478746 PLXNA3P51805 1871 aa19.63■□□□□ 0.73
VIM-204ENST00000478746 PLCB3Q01970 1234 aa19.63■□□□□ 0.73
VIM-204ENST00000478746 PTH1RQ03431 593 aa19.63■□□□□ 0.73
VIM-204ENST00000478746 SRBD1Q8N5C6 995 aaKnown RBP19.63■□□□□ 0.73
VIM-204ENST00000478746 MXRA8Q9BRK3 442 aa19.63■□□□□ 0.73
VIM-204ENST00000478746 NGRNQ9NPE2 291 aaKnown RBP19.63■□□□□ 0.73
VIM-204ENST00000478746 SORCS3Q9UPU3 1222 aa19.63■□□□□ 0.73
VIM-204ENST00000478746 TAF6LQ9Y6J9 622 aa19.63■□□□□ 0.73
VIM-204ENST00000478746 NFASCO94856 1347 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 HIDE1A8MVS5 230 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 DDAH1O94760 285 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 IGHDP01880 384 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 FGFR1P11362 822 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 ANTXR2P58335 489 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 MTMR3Q13615 1198 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 AAMPQ13685 434 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 TPRNQ4KMQ1 711 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 CES5AQ6NT32 575 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 KIAA0319LQ8IZA0 1049 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 TMEM161AQ9NX61 479 aa19.62■□□□□ 0.73
VIM-204ENST00000478746 HBP1O60381 514 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 PLEKHA8P1O95397 391 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 BRD1O95696 1058 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 NBL1P41271 181 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 SLC26A2P50443 739 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 FAM189BP81408 668 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 KRT17Q04695 432 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 TMC7Q7Z402 723 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 CMTR1Q8N1G2 835 aaKnown RBP19.61■□□□□ 0.73
VIM-204ENST00000478746 CYP2W1Q8TAV3 490 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 TMEM40Q8WWA1 233 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 RUFY2Q8WXA3 655 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 CASP10Q92851 521 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 ELAC1Q9H777 363 aaKnown RBP19.61■□□□□ 0.73
VIM-204ENST00000478746 LY9Q9HBG7 655 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 FAM186AA6NE01 2351 aa19.61■□□□□ 0.73
VIM-204ENST00000478746 PRR23AA6NEV1 266 aa19.6■□□□□ 0.73
VIM-204ENST00000478746 ATG7O95352 703 aa19.6■□□□□ 0.73
VIM-204ENST00000478746 ARP10275 920 aa19.6■□□□□ 0.73
VIM-204ENST00000478746 PDE4AP27815 886 aa19.6■□□□□ 0.73
VIM-204ENST00000478746 KCNT2Q6UVM3 1135 aa19.6■□□□□ 0.73
VIM-204ENST00000478746 MB21D2Q8IYB1 491 aaPredicted RBP19.6■□□□□ 0.73
VIM-204ENST00000478746 TMEM105Q8N8V8 129 aa19.6■□□□□ 0.73
VIM-204ENST00000478746 NECTIN4Q96NY8 510 aa19.6■□□□□ 0.73
VIM-204ENST00000478746 EVPLQ92817 2033 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 MYO15AQ9UKN7 3530 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 hCG_1642624A0A1W2PR95 340 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 C2CD4DB7Z1M9 353 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 CRYBB1P53674 252 aaPredicted RBP19.59■□□□□ 0.73
VIM-204ENST00000478746 ITIH3Q06033 890 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 ASTLQ6HA08 431 aaPredicted RBP19.59■□□□□ 0.73
VIM-204ENST00000478746 CASC1Q6TDU7 716 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 NFXL1Q6ZNB6 911 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 LRRC55Q6ZSA7 311 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 TMTC2Q8N394 836 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 ZNF558Q96NG5 402 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 CASD1Q96PB1 797 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 TMEM117Q9H0C3 514 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 ADAM7Q9H2U9 754 aa19.59■□□□□ 0.73
VIM-204ENST00000478746 POMKQ9H5K3 350 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms