RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 RAB6AP20340 208 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 VAMP1P23763 118 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 ARNTP27540 789 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 ID3Q02535 119 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 GABPAQ06546 454 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 ZNF252P-AS1Q0IIN9 211 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 HDAC1Q13547 482 aaPredicted RBP7.51□□□□□ -1.21
HOXB3-209ENST00000478644 SF3A1Q15459 793 aaKnown RBP7.51□□□□□ -1.21
HOXB3-209ENST00000478644 MAP3K21Q5TCX8 1036 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 OGFOD3Q6PK18 319 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 GPR142Q7Z601 462 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 ADGRA1Q86SQ6 560 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 ABRAQ8N0Z2 381 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 SHISA4Q96DD7 197 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 FANCD2OSQ96PS1 177 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 HAUS7Q99871 368 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 MROH8Q9H579 483 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 DISC1Q9NRI5 854 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 MCM9Q9NXL9 1143 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 RBPJLQ9UBG7 517 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 NRBP1Q9UHY1 535 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 SYNPO2Q9UMS6 1093 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 SUPT16HQ9Y5B9 1047 aaKnown RBP7.51□□□□□ -1.21
HOXB3-209ENST00000478644 ZNF532Q9HCE3 1301 aa7.51□□□□□ -1.21
HOXB3-209ENST00000478644 ATAD5Q96QE3 1844 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 HTTP42858 3142 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 KIAA0100Q14667 2235 aaKnown RBP7.5□□□□□ -1.21
HOXB3-209ENST00000478644 ERC2O15083 957 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 CYP26A1O43174 497 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 DYNC1LI2O43237 492 aaPredicted RBP7.5□□□□□ -1.21
HOXB3-209ENST00000478644 NME2P22392 152 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 IRAK1P51617 712 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 DYNLL1P63167 89 aaKnown RBP7.5□□□□□ -1.21
HOXB3-209ENST00000478644 ATP2B2Q01814 1243 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 ALG1LQ6GMV1 187 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 MIGA1Q8NAN2 632 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 GIPC2Q8TF65 315 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 USP6NLQ92738 828 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 NECAB3Q96P71 396 aaPredicted RBP7.5□□□□□ -1.21
HOXB3-209ENST00000478644 EMILIN2Q9BXX0 1053 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 C11orf49Q9H6J7 331 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 DNAJC18Q9H819 358 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 KANSL2Q9H9L4 492 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 DCP1AQ9NPI6 582 aaPredicted RBP7.5□□□□□ -1.21
HOXB3-209ENST00000478644 ARPP21Q9UBL0 812 aaPredicted RBP7.5□□□□□ -1.21
HOXB3-209ENST00000478644 CCDC39Q9UFE4 941 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 SAP30BPQ9UHR5 308 aaKnown RBP7.5□□□□□ -1.21
HOXB3-209ENST00000478644 GPN3Q9UHW5 284 aaPredicted RBP7.5□□□□□ -1.21
HOXB3-209ENST00000478644 PPM1HQ9ULR3 514 aa7.5□□□□□ -1.21
HOXB3-209ENST00000478644 KRTAP9-6A0A140TA67 174 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 GOLIM4O00461 696 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 WDR46O15213 610 aaKnown RBP7.49□□□□□ -1.21
HOXB3-209ENST00000478644 SLC3A2P08195 630 aaKnown RBP7.49□□□□□ -1.21
HOXB3-209ENST00000478644 VCAM1P19320 739 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 CYP2B6P20813 491 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 GSTT1P30711 240 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 SHMT1P34896 483 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 ADD2P35612 726 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 NT5C2P49902 561 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 FXR1P51114 621 aaKnown RBP eCLIP7.49□□□□□ -1.21
HOXB3-209ENST00000478644 RRP1BQ14684 758 aaKnown RBP7.49□□□□□ -1.21
HOXB3-209ENST00000478644 SBK1Q52WX2 424 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 OLFML2BQ68BL8 750 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 SCARA3Q6AZY7 606 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 NFXL1Q6ZNB6 911 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 ZNF765Q7L2R6 523 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 DPP9Q86TI2 863 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 SULF2Q8IWU5 870 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 MSL3Q8N5Y2 521 aaKnown RBP7.49□□□□□ -1.21
HOXB3-209ENST00000478644 ARRDC4Q8NCT1 418 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 STK35Q8TDR2 534 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 PAWRQ96IZ0 340 aaKnown RBP7.49□□□□□ -1.21
HOXB3-209ENST00000478644 DNAJC2Q99543 621 aaKnown RBP7.49□□□□□ -1.21
HOXB3-209ENST00000478644 OSBPL7Q9BZF2 842 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 RWDD1Q9H446 243 aaPredicted RBP7.49□□□□□ -1.21
HOXB3-209ENST00000478644 ECHDC1Q9NTX5 307 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 DIS3Q9Y2L1 958 aaKnown RBP7.49□□□□□ -1.21
HOXB3-209ENST00000478644 TMX2Q9Y320 296 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 TTC41PQ6P2S7 1318 aa7.49□□□□□ -1.21
HOXB3-209ENST00000478644 TCRBV5S4A2TA0A5A2 114 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 MPHOSPH10O00566 681 aaKnown RBP7.48□□□□□ -1.21
HOXB3-209ENST00000478644 PLCD1P51178 756 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 CACNB2Q08289 660 aaPredicted RBP7.48□□□□□ -1.21
HOXB3-209ENST00000478644 GRB14Q14449 540 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 ZC3H12AQ5D1E8 599 aaKnown RBP7.48□□□□□ -1.21
HOXB3-209ENST00000478644 C12orf60Q5U649 245 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 C16orf86Q6ZW13 317 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 EXOC6Q8TAG9 804 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 PAGR1Q9BTK6 254 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 NACAP1Q9BZK3 213 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 TANGO6Q9C0B7 1094 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 RPAP3Q9H6T3 665 aaPredicted RBP7.48□□□□□ -1.21
HOXB3-209ENST00000478644 ANTXR1Q9H6X2 564 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 ADGRE2Q9UHX3 823 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 MYH1P12882 1939 aa7.48□□□□□ -1.21
HOXB3-209ENST00000478644 CENPFP49454 3210 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 FCER1AP12319 257 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 BMP6P22004 513 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 ICA1Q05084 483 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 CCDC84Q86UT8 332 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms