RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 SFMBT2Q5VUG0 894 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SNRNP48Q6IEG0 339 aaKnown RBP13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PADI6Q6TGC4 694 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 NSMFQ6X4W1 530 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CATSPERGQ6ZRH7 1159 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 BANK1Q8NDB2 785 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 REPS2Q8NFH8 660 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 IWS1Q96ST2 819 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SENP7Q9BQF6 1050 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 GBP3Q9H0R5 595 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 TMEM206Q9H813 350 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 REXO2Q9Y3B8 237 aaKnown RBP13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 BZW2Q9Y6E2 419 aaKnown RBP13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SERPING1P05155 500 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 HOXD13P35453 343 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 KIF11P52732 1056 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PSMC5P62195 406 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 HERVK_113P62684 666 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ITGB3BPQ13352 177 aaPredicted RBP13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ERCC6LQ2NKX8 1250 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ZNF746Q6NUN9 644 aaPredicted RBP13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SRGAP1Q7Z6B7 1085 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 VSIG10LQ86VR7 867 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SMAP1Q8IYB5 467 aaPredicted RBP13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 GPR161Q8N6U8 529 aaKnown RBP13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 NLGN2Q8NFZ4 835 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 IL31RAQ8NI17 732 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 TRPM4Q8TD43 1214 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 GOLGA1Q92805 767 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 DRC1Q96MC2 740 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 IRX2Q9BZI1 471 aaPredicted RBP13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ACAD9Q9H845 621 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ANKEF1Q9NU02 776 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ARHGAP20Q9P2F6 1191 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 GUCA1BQ9UMX6 200 aa13.7□□□□□ -0.22
TRAF3IP3-213ENST00000478359 RLFQ13129 1914 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 POTEB2H3BUK9 544 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 NKRFO15226 690 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ANXA13P27216 316 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PPP2R5AQ15172 486 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SLC30A10Q6XR72 485 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SLC9A9Q8IVB4 645 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 TRIM58Q8NG06 486 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SMCR8Q8TEV9 937 aaPredicted RBP13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 RABGGTAQ92696 567 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CCDC94Q9BW85 323 aaPredicted RBP13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 LSM14BQ9BX40 385 aaKnown RBP13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 IFIH1Q9BYX4 1025 aaKnown RBP13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ST6GALNAC4Q9H4F1 302 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 AIPL1Q9NZN9 384 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 WRAP73Q9P2S5 460 aaPredicted RBP13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ZNF214Q9UL59 606 aaPredicted RBP13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 FRMD4BQ9Y2L6 1034 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 AFG3L2Q9Y4W6 797 aa13.69□□□□□ -0.22
TRAF3IP3-213ENST00000478359 COL11A1P12107 1806 aaPredicted RBP13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 DDX39AO00148 427 aaKnown RBP13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 EPHB6O15197 1021 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 TGFB1I1O43294 461 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 AKAP3O75969 853 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 TUBBP07437 444 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 NR3C2P08235 984 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 MYCLP12524 364 aaPredicted RBP13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 YWHABP31946 246 aaKnown RBP13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 RARRES1P49788 294 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 BAATQ14032 418 aaPredicted RBP13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 EXOC3L4Q17RC7 722 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 GNPTABQ3T906 1256 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 GBP6Q6ZN66 633 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 INPP4AQ96PE3 977 aaPredicted RBP13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PURBQ96QR8 312 aaKnown RBP13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 FIZ1Q96SL8 496 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 STRA6Q9BX79 667 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ADARB2Q9NS39 739 aaKnown RBP13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 GOLGB1Q14789 3259 aaKnown RBP13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 MYH11P35749 1972 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 NFASCO94856 1347 aa13.68□□□□□ -0.22
TRAF3IP3-213ENST00000478359 TESPA1A2RU30 521 aaPredicted RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SFI1A8K8P3 1242 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 RBAK-RBAKDNI3L0D1 243 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 HIP1RO75146 1068 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PPP1R37O75864 691 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 NOL4O94818 638 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 NMT1P30419 496 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ABCD1P33897 745 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 POLR2FP61218 127 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 DGKZQ13574 1117 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 C10orf76Q5T2E6 689 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 OTUD6AQ7L8S5 288 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 CHST13Q8NET6 341 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SECISBP2LQ93073 1101 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 RPGRIP1Q96KN7 1286 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 SPON1Q9HCB6 807 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PCDHA13Q9Y5I0 950 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PCDHA10Q9Y5I2 948 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 LOC285556D6RIA3 1793 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 ZMYM2Q9UBW7 1377 aa13.67□□□□□ -0.22
TRAF3IP3-213ENST00000478359 PJA2O43164 708 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms