RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TMEM62Q0P6H9 643 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 EP400NLQ6ZTU2 488 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 CRYGNQ8WXF5 182 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 P2RX5Q93086 422 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 PHKBQ93100 1093 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 ZNF689Q96CS4 500 aaPredicted RBP16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 MAP7D2Q96T17 732 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 AGO3Q9H9G7 860 aaKnown RBP16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 RC3H2Q9HBD1 1191 aaKnown RBP16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 SFNP31947 248 aa16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 JAK3P52333 1124 aa16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 NLRP5P59047 1200 aa16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 NFX1Q12986 1120 aaKnown RBP16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 PKN1Q16512 942 aa16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 TCEAL5Q5H9L2 206 aa16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 PTCRAQ6ISU1 281 aaPredicted RBP16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 RUFY3Q7L099 469 aa16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 RIT2Q99578 217 aa16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 AAASQ9NRG9 546 aa16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 MAFBQ9Y5Q3 323 aaPredicted RBP16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 NCOR1O75376 2440 aa16.35■□□□□ 0.21
SMARCE1-209ENST00000478349 BDP1A6H8Y1 2624 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 DOCK5Q9H7D0 1870 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 FSD2A1L4K1 749 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 DHX15O43143 795 aaKnown RBP16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 GAS7O60861 476 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 MMP1P03956 469 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 SSTR3P32745 418 aaPredicted RBP16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 SARSP49591 514 aaKnown RBP16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 USP11P51784 963 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 EVCP57679 992 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 SSRP1Q08945 709 aaKnown RBP16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 CSPP1Q1MSJ5 1256 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 METTL13Q8N6R0 699 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 NEK9Q8TD19 979 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 ZBTB10Q96DT7 871 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 NRBP2Q9NSY0 501 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 CLDND1Q9NY35 253 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 PCDHB7Q9Y5E2 793 aa16.34■□□□□ 0.21
SMARCE1-209ENST00000478349 CDKL5O76039 1030 aa16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 DEXIO95424 95 aa16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 PDIA3P30101 505 aaKnown RBP16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 CRYBB1P53674 252 aaPredicted RBP16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 GALNT17Q6IS24 598 aa16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 KIAA0319LQ8IZA0 1049 aa16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 LINC01599Q8WXQ3 324 aa16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 TEKT3Q9BXF9 490 aa16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 TM6SF1Q9BZW5 370 aa16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 VPS54Q9P1Q0 977 aa16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 GABBR1Q9UBS5 961 aa16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 PRKAG3Q9UGI9 489 aa16.33■□□□□ 0.2
SMARCE1-209ENST00000478349 HOXA2O43364 376 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 C22orf31O95567 290 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 XBP1P17861 261 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 COL19A1Q14993 1142 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 NTRK3Q16288 839 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 TMEM31Q5JXX7 168 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 SPOUT1Q5T280 376 aaKnown RBP16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 LRCH2Q5VUJ6 765 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 SLC24A5Q71RS6 500 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 FAM178BQ8IXR5 827 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 GJD3Q8N144 294 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 RDM1Q8NG50 284 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 ZNF274Q96GC6 653 aaPredicted RBP16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 SCLT1Q96NL6 688 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 POP1Q99575 1024 aaKnown RBP16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 ZSWIM6Q9HCJ5 1215 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 ERVK-5Q9HDB9 667 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 DISC1Q9NRI5 854 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 AKT3Q9Y243 479 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 HCN4Q9Y3Q4 1203 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 PCDHB12Q9Y5F1 795 aa16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 MRPL42Q9Y6G3 142 aaKnown RBP16.32■□□□□ 0.2
SMARCE1-209ENST00000478349 KAT6AQ92794 2004 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 GRXCR2A6NFK2 248 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 H3BQ06 376 aaPredicted RBP16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 GRM6O15303 877 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 OATP04181 439 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 ALADP13716 330 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 CDC42EP1Q00587 391 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 KIZQ2M2Z5 673 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 TMEM266Q2M3C6 531 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 PAN2Q504Q3 1202 aaKnown RBP16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 RASGRP4Q8TDF6 673 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 ADAM2Q99965 735 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 NCOA5Q9HCD5 579 aaKnown RBP16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 RGS18Q9NS28 235 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 PCDHA4Q9UN74 947 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 PLAGL2Q9UPG8 496 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 RALGAPA2Q2PPJ7 1873 aa16.31■□□□□ 0.2
SMARCE1-209ENST00000478349 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 LINC00271P0C7V0 271 aa16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 ZSCAN20P17040 1043 aaPredicted RBP16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 PRKCEQ02156 737 aa16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 UBE3AQ05086 875 aa16.3■□□□□ 0.2
SMARCE1-209ENST00000478349 TBC1D8BQ0IIM8 1120 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms