RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 PPP2R5CQ13362 524 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 TMEM240Q5SV17 173 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 MARCH8Q5T0T0 291 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 SWSAP1Q6NVH7 229 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 TAF2Q6P1X5 1199 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 PDXDC2PQ6P474 469 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 TRAF7Q6Q0C0 670 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 POTEBQ6S5H4 581 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 RPAINQ86UA6 219 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 SLFN12Q8IYM2 578 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 RPUSD2Q8IZ73 545 aaKnown RBP11.01□□□□□ -0.65
NIFK-205ENST00000477693 ATP8B4Q8TF62 1192 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 HAS1Q92839 578 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 GJA10Q969M2 543 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.01□□□□□ -0.655e-8■□□□□ 8.8
NIFK-205ENST00000477693 UNC45AQ9H3U1 944 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 TUBE1Q9UJT0 475 aa11.01□□□□□ -0.65
NIFK-205ENST00000477693 LAMA2P24043 3122 aaKnown RBP11□□□□□ -0.65
NIFK-205ENST00000477693 CHMP2AO43633 222 aa11□□□□□ -0.65
NIFK-205ENST00000477693 PPP6R2O75170 966 aa11□□□□□ -0.65
NIFK-205ENST00000477693 ACRP10323 421 aa11□□□□□ -0.65
NIFK-205ENST00000477693 ATP4AP20648 1035 aa11□□□□□ -0.65
NIFK-205ENST00000477693 DNM1Q05193 864 aaKnown RBP11□□□□□ -0.65
NIFK-205ENST00000477693 GPNMBQ14956 572 aa11□□□□□ -0.65
NIFK-205ENST00000477693 SF3A1Q15459 793 aaKnown RBP11□□□□□ -0.65
NIFK-205ENST00000477693 ZNF618Q5T7W0 954 aa11□□□□□ -0.65
NIFK-205ENST00000477693 RASIP1Q5U651 963 aa11□□□□□ -0.65
NIFK-205ENST00000477693 LRRC8DQ7L1W4 858 aa11□□□□□ -0.65
NIFK-205ENST00000477693 FBXO22Q8NEZ5 403 aa11□□□□□ -0.65
NIFK-205ENST00000477693 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
NIFK-205ENST00000477693 SPATA32Q96LK8 384 aa11□□□□□ -0.65
NIFK-205ENST00000477693 RNPC3Q96LT9 517 aaKnown RBP11□□□□□ -0.65
NIFK-205ENST00000477693 TMEM121BQ9BXQ6 578 aaPredicted RBP11□□□□□ -0.65
NIFK-205ENST00000477693 VAV3Q9UKW4 847 aa11□□□□□ -0.65
NIFK-205ENST00000477693 SAMM50Q9Y512 469 aa11□□□□□ -0.65
NIFK-205ENST00000477693 COL1A2P08123 1366 aa11□□□□□ -0.65
NIFK-205ENST00000477693 GOLGA6L4A6NEF3 574 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 KIF28PB7ZC32 967 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 NEMFO60524 1076 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 MBD3O95983 291 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 FGBP02675 491 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 CXCL10P02778 98 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 RPLP2P05387 115 aaKnown RBP10.99□□□□□ -0.65
NIFK-205ENST00000477693 THPOP40225 353 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 UBE2HP62256 183 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 SLC39A14Q15043 492 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 NFKBIBQ15653 356 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 CALCRLQ16602 461 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 LCE2DQ5TA82 110 aaPredicted RBP10.99□□□□□ -0.65
NIFK-205ENST00000477693 FOXD4L5Q5VV16 416 aaPredicted RBP10.99□□□□□ -0.65
NIFK-205ENST00000477693 ARL6IP4Q66PJ3 421 aaKnown RBP10.99□□□□□ -0.65
NIFK-205ENST00000477693 RUFY4Q6ZNE9 571 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 ZNF365Q70YC5 407 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 MIER3Q7Z3K6 550 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 LINC00301Q8NCQ3 95 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 LEO1Q8WVC0 666 aaPredicted RBP10.99□□□□□ -0.65
NIFK-205ENST00000477693 FOXD4L4Q8WXT5 416 aaPredicted RBP10.99□□□□□ -0.65
NIFK-205ENST00000477693 HERVK_113Q902F9 699 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 FAM167AQ96KS9 214 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 GABBR1Q9UBS5 961 aa10.99□□□□□ -0.65
NIFK-205ENST00000477693 RSPH10B2B2RC85 870 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 ZBTB42B2RXF5 422 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 EML1O00423 815 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 SOX1O00570 391 aaPredicted RBP10.98□□□□□ -0.65
NIFK-205ENST00000477693 ZNF862O60290 1169 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 NBNO60934 754 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 OATP04181 439 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 RSPH10BP0C881 870 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 IGBP1P78318 339 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 PRKCEQ02156 737 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 MBTPS1Q14703 1052 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 STK38Q15208 465 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 UGCGQ16739 394 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 ZNF484Q5JVG2 852 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 FAM26DQ5JW98 314 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 TTC38Q5R3I4 469 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 GPR153Q6NV75 609 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 DEFB128Q7Z7B8 93 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 RSPH3Q86UC2 560 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 CKAP2LQ8IYA6 745 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 TRAPPC12Q8WVT3 735 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 LRCH3Q96II8 777 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 MTMR9Q96QG7 549 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 MTIF3Q9H2K0 278 aaKnown RBP10.98□□□□□ -0.65
NIFK-205ENST00000477693 PCDHA2Q9Y5H9 948 aa10.98□□□□□ -0.65
NIFK-205ENST00000477693 SMIM35A0A1B0GVV1 85 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 A0A1W2PQ27 194 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 A0A1W2PQ64 194 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 A0A1W2PQD8 194 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 SPTLC2O15270 562 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 MARCH6O60337 910 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 BAIAP3O94812 1187 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 ACTN1P12814 892 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 KLRC1P26715 233 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 MCM7P33993 719 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 PRPHP41219 470 aa10.97□□□□□ -0.65
NIFK-205ENST00000477693 TOB1P50616 345 aaPredicted RBP10.97□□□□□ -0.65
NIFK-205ENST00000477693 SMAD3P84022 425 aaKnown RBP10.97□□□□□ -0.65
NIFK-205ENST00000477693 ADALQ6DHV7 355 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms