RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 IPO9Q96P70 1041 aaKnown RBP19.9■□□□□ 0.78
PTPN7-209ENST00000477554 LLPHQ9BRT6 129 aaKnown RBP19.9■□□□□ 0.78
PTPN7-209ENST00000477554 PRDM12Q9H4Q4 367 aa19.9■□□□□ 0.78
PTPN7-209ENST00000477554 RFXAPO00287 272 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 CAND2O75155 1236 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 SLC26A2P50443 739 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 CLCN3P51790 818 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 SPIRE1Q08AE8 756 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 CUL4AQ13619 759 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 NBR1Q14596 966 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 ZNF579Q8NAF0 562 aaKnown RBP19.89■□□□□ 0.77
PTPN7-209ENST00000477554 TMEM40Q8WWA1 233 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 C8orf76Q96K31 380 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 CEP89Q96ST8 783 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 SLC9A7Q96T83 725 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 TMEM60Q9H2L4 133 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 PCDHA11Q9Y5I1 949 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 MYO9BQ13459 2157 aa19.89■□□□□ 0.77
PTPN7-209ENST00000477554 PARNO95453 639 aaKnown RBP19.88■□□□□ 0.77
PTPN7-209ENST00000477554 OATP04181 439 aa19.88■□□□□ 0.77
PTPN7-209ENST00000477554 HSP90AA1P07900 732 aaKnown RBP19.88■□□□□ 0.77
PTPN7-209ENST00000477554 CD52P31358 61 aa19.88■□□□□ 0.77
PTPN7-209ENST00000477554 DRP2Q13474 957 aa19.88■□□□□ 0.77
PTPN7-209ENST00000477554 IKBKEQ14164 716 aa19.88■□□□□ 0.77
PTPN7-209ENST00000477554 ADGRE1Q14246 886 aa19.88■□□□□ 0.77
PTPN7-209ENST00000477554 TMEM266Q2M3C6 531 aa19.88■□□□□ 0.77
PTPN7-209ENST00000477554 LRRC71Q8N4P6 559 aa19.88■□□□□ 0.77
PTPN7-209ENST00000477554 BBXQ8WY36 941 aaPredicted RBP19.88■□□□□ 0.77
PTPN7-209ENST00000477554 IFIH1Q9BYX4 1025 aaKnown RBP19.88■□□□□ 0.77
PTPN7-209ENST00000477554 TCEAL9Q9UHQ7 104 aa19.88■□□□□ 0.77
PTPN7-209ENST00000477554 MSRAQ9UJ68 235 aa19.88■□□□□ 0.77
PTPN7-209ENST00000477554 STXBP5LQ9Y2K9 1186 aa19.88■□□□□ 0.77
PTPN7-209ENST00000477554 SMIM35A0A1B0GVV1 85 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 ABHD14A-ACY1A0A1B0GW23 586 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 ZBTB39O15060 712 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 VTNP04004 478 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 KCNJ6P48051 423 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 JAK3P52333 1124 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 RAB30Q15771 203 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 ZNF484Q5JVG2 852 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 PLA2G4FQ68DD2 849 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 MYOCDQ8IZQ8 938 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 LINC01465Q8N7H1 131 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 FBXO18Q8NFZ0 1043 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 RGL1Q9NZL6 768 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 GINS2Q9Y248 185 aa19.87■□□□□ 0.77
PTPN7-209ENST00000477554 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.87■□□□□ 0.77
PTPN7-209ENST00000477554 TAP1Q03518 808 aa19.86■□□□□ 0.77
PTPN7-209ENST00000477554 PPP2R5CQ13362 524 aa19.86■□□□□ 0.77
PTPN7-209ENST00000477554 TRIM29Q14134 588 aa19.86■□□□□ 0.77
PTPN7-209ENST00000477554 PPP2R2DQ66LE6 453 aa19.86■□□□□ 0.77
PTPN7-209ENST00000477554 RTN4RL1Q86UN2 441 aaPredicted RBP19.86■□□□□ 0.77
PTPN7-209ENST00000477554 PHOSPHO2Q8TCD6 241 aa19.86■□□□□ 0.77
PTPN7-209ENST00000477554 SEPT8Q92599 483 aa19.86■□□□□ 0.77
PTPN7-209ENST00000477554 INTS4Q96HW7 963 aaKnown RBP19.86■□□□□ 0.77
PTPN7-209ENST00000477554 BRMS1Q9HCU9 246 aa19.86■□□□□ 0.77
PTPN7-209ENST00000477554 TRPV2Q9Y5S1 764 aa19.86■□□□□ 0.77
PTPN7-209ENST00000477554 A0A0C4DFX4 3053 aa19.86■□□□□ 0.77
PTPN7-209ENST00000477554 COL1A2P08123 1366 aa19.86■□□□□ 0.77
PTPN7-209ENST00000477554 COL4A6Q14031 1691 aa19.86■□□□□ 0.77
PTPN7-209ENST00000477554 XIRP2A4UGR9 3374 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 A0A087WWV3 80 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 TLL1O43897 1013 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 GJB5O95377 273 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 GCFC2P16383 781 aaKnown RBP19.85■□□□□ 0.77
PTPN7-209ENST00000477554 SFNP31947 248 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 TARBP2Q15633 366 aaKnown RBP19.85■□□□□ 0.77
PTPN7-209ENST00000477554 KIZQ2M2Z5 673 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 NCAPH2Q6IBW4 605 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 ANO5Q75V66 913 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 METTL13Q8N6R0 699 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 USP38Q8NB14 1042 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 CELF4Q9BZC1 486 aaKnown RBP19.85■□□□□ 0.77
PTPN7-209ENST00000477554 TMX1Q9H3N1 280 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 SLC28A3Q9HAS3 691 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 TMEM265A0A087WTH1 108 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 MGEA5O60502 916 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 GPR32O75388 356 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 UPP2O95045 317 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 MTERF2Q49AM1 385 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 RSPH3Q86UC2 560 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 FAM20AQ96MK3 541 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 MTMR9Q96QG7 549 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 OSMRQ99650 979 aa19.85■□□□□ 0.77
PTPN7-209ENST00000477554 SEPT9Q9UHD8 586 aaPredicted RBP19.85■□□□□ 0.77
PTPN7-209ENST00000477554 NOC2LQ9Y3T9 749 aaKnown RBP19.85■□□□□ 0.77
PTPN7-209ENST00000477554 COL4A4P53420 1690 aaPredicted RBP19.84■□□□□ 0.77
PTPN7-209ENST00000477554 VCANP13611 3396 aa19.84■□□□□ 0.77
PTPN7-209ENST00000477554 MCM7P33993 719 aa19.84■□□□□ 0.77
PTPN7-209ENST00000477554 NPEPPSP55786 919 aa19.84■□□□□ 0.77
PTPN7-209ENST00000477554 HMGN5P82970 282 aaKnown RBP19.84■□□□□ 0.77
PTPN7-209ENST00000477554 CYP4A11Q02928 519 aa19.84■□□□□ 0.77
PTPN7-209ENST00000477554 CTTNQ14247 550 aaKnown RBP19.84■□□□□ 0.77
PTPN7-209ENST00000477554 ZNF174Q15697 407 aa19.84■□□□□ 0.77
PTPN7-209ENST00000477554 EFCAB12Q6NXP0 572 aa19.84■□□□□ 0.77
PTPN7-209ENST00000477554 TSHZ1Q6ZSZ6 1077 aa19.84■□□□□ 0.77
PTPN7-209ENST00000477554 DYDC2Q96IM9 177 aa19.84■□□□□ 0.77
PTPN7-209ENST00000477554 PADI3Q9ULW8 664 aa19.84■□□□□ 0.77
PTPN7-209ENST00000477554 DDX11L8A8MPP1 907 aa19.83■□□□□ 0.76
PTPN7-209ENST00000477554 ENPP3O14638 875 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms