RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 WTIPA6NIX2 430 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-220ENST00000477528 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-220ENST00000477528 CHRNA5P30532 468 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 MAPK4P31152 587 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 KRT76Q01546 638 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 SH3RF1Q7Z6J0 888 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 LDHDQ86WU2 507 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 MMS19Q96T76 1030 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 RAVER2Q9HCJ3 691 aaKnown RBP15.84■□□□□ 0.13
HDAC6-220ENST00000477528 PRR12Q9ULL5 1215 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 GOLGA8IPA6NC78 632 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 GOLGA8JA6NMD2 632 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 FOXP2O15409 715 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 MRPS25P82663 173 aaKnown RBP15.84■□□□□ 0.13
HDAC6-220ENST00000477528 SUPT20HL1Q3ZLR7 823 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 HOMER3Q9NSC5 361 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 PCDHB4Q9Y5E5 795 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 TBX2Q13207 712 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-220ENST00000477528 SLC18A3Q16572 532 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 PPP1R2P3Q6NXS1 205 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 KCTD17Q8N5Z5 321 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 BBOF1Q8ND07 529 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 KCND1Q9NSA2 647 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 TMEM191BP0C7N4 346 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 RPA1P27694 616 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 NNTQ13423 1086 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 GADL1Q6ZQY3 521 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 SPATA4Q8NEY3 305 aa15.84■□□□□ 0.13
HDAC6-220ENST00000477528 KLK7P49862 253 aa15.83■□□□□ 0.13
HDAC6-220ENST00000477528 METTL13Q8N6R0 699 aa15.83■□□□□ 0.13
HDAC6-220ENST00000477528 RFX1P22670 979 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 MTERF2Q49AM1 385 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 ZNF277Q9NRM2 450 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-220ENST00000477528 FGGP02679 453 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 ATF2P15336 505 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 ALDH3A1P30838 453 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 SFNP31947 248 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 GYS2P54840 703 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 DHX9Q08211 1270 aaKnown RBP15.83■□□□□ 0.12
HDAC6-220ENST00000477528 DRAP1Q14919 205 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-220ENST00000477528 CALR3Q96L12 384 aaKnown RBP15.83■□□□□ 0.12
HDAC6-220ENST00000477528 INTS2Q9H0H0 1204 aaKnown RBP15.83■□□□□ 0.12
HDAC6-220ENST00000477528 PIM2Q9P1W9 311 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 PARP4Q9UKK3 1724 aaKnown RBP15.83■□□□□ 0.12
HDAC6-220ENST00000477528 POLR2BP30876 1174 aaKnown RBP15.83■□□□□ 0.12
HDAC6-220ENST00000477528 PLTPP55058 493 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 ZBTB16Q05516 673 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 MCPH1Q8NEM0 835 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 IPO4Q8TEX9 1081 aaKnown RBP15.83■□□□□ 0.12
HDAC6-220ENST00000477528 RUBCNQ92622 972 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 ODF2LQ9ULJ1 636 aa15.83■□□□□ 0.12
HDAC6-220ENST00000477528 MIF4GDA9UHW6 222 aaKnown RBP15.82■□□□□ 0.12
HDAC6-220ENST00000477528 TBC1D8O95759 1140 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 ANXA13P27216 316 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 GCLMP48507 274 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 STYK1Q6J9G0 422 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 FAM163AQ96GL9 167 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-220ENST00000477528 ZCCHC17Q9NP64 241 aaKnown RBP15.82■□□□□ 0.12
HDAC6-220ENST00000477528 ZNF233A6NK53 670 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 SMIM22K7EJ46 135 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 NMT1P30419 496 aaKnown RBP15.82■□□□□ 0.12
HDAC6-220ENST00000477528 CCT5P48643 541 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 VPS41P49754 854 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 SLC8A3P57103 927 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 DR1Q01658 176 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 FIGNQ5HY92 759 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 TSNARE1Q96NA8 513 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 EHD4Q9H223 541 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 GINS2Q9Y248 185 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 ATP8A1Q9Y2Q0 1164 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 E2F4Q16254 413 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 HADHQ16836 314 aaKnown RBP15.82■□□□□ 0.12
HDAC6-220ENST00000477528 TTC19Q6DKK2 380 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-220ENST00000477528 SEPT14Q6ZU15 432 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 SULF1Q8IWU6 871 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 CCDC89Q8N998 374 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 PLAGL2Q9UPG8 496 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 KDM3BQ7LBC6 1761 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 VAMP7P51809 220 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 UAP1Q16222 522 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-220ENST00000477528 MOXD1Q6UVY6 613 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 CACNA2D3Q8IZS8 1091 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 COG1Q8WTW3 980 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 JPH2Q9BR39 696 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-220ENST00000477528 PODXL2Q9NZ53 605 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 PTPN22Q9Y2R2 807 aa15.82■□□□□ 0.12
HDAC6-220ENST00000477528 BRDTQ58F21 947 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-220ENST00000477528 GSPT2Q8IYD1 628 aaKnown RBP15.81■□□□□ 0.12
HDAC6-220ENST00000477528 ZDHHC15Q96MV8 337 aa15.81■□□□□ 0.12
HDAC6-220ENST00000477528 KDM4FA0A1W2PPD8 638 aa15.81■□□□□ 0.12
HDAC6-220ENST00000477528 HIP1RO75146 1068 aa15.81■□□□□ 0.12
HDAC6-220ENST00000477528 STAM2O75886 525 aa15.81■□□□□ 0.12
HDAC6-220ENST00000477528 ECEL1O95672 775 aa15.81■□□□□ 0.12
HDAC6-220ENST00000477528 FDX1P10109 184 aa15.81■□□□□ 0.12
HDAC6-220ENST00000477528 ATF7P17544 494 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-220ENST00000477528 C6orf163Q5TEZ5 329 aa15.81■□□□□ 0.12
HDAC6-220ENST00000477528 MRRFQ96E11 262 aaKnown RBP15.81■□□□□ 0.12
HDAC6-220ENST00000477528 KCND2Q9NZV8 630 aa15.81■□□□□ 0.12
HDAC6-220ENST00000477528 SLC16A4O15374 487 aa15.81■□□□□ 0.12
HDAC6-220ENST00000477528 THAP12O43422 761 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms