RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 H7C1D1 291 aa6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 KPNA6O60684 536 aa6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 ATP2A2P16615 1042 aaKnown RBP6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 CSF2RBP32927 897 aa6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 ALDH6A1Q02252 535 aaKnown RBP6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 TBC1D10BQ4KMP7 808 aaPredicted RBP6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 UBXN11Q5T124 520 aa6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 CNNM4Q6P4Q7 775 aa6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 ZNF662Q6ZS27 426 aa6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 KBTBD2Q8IY47 623 aa6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 AHI1Q8N157 1196 aa6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 FOXB1Q99853 325 aa6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 SSBP3Q9BWW4 388 aaPredicted RBP6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 ZDHHC5Q9C0B5 715 aa6.43□□□□□ -1.38
SOX2-OT-207ENST00000476964 KRT37O76014 449 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 PLATP00750 562 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 PTX3P26022 381 aaPredicted RBP6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 EIF4HQ15056 248 aaKnown RBP6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 EPHA7Q15375 998 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 SURF1Q15526 300 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 SEPT7Q16181 437 aaKnown RBP6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 ZNF827Q17R98 1081 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 TRIM68Q6AZZ1 485 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 NXPE1Q8N323 547 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 HIPK4Q8NE63 616 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 ELF4Q99607 663 aaPredicted RBP6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 IFT57Q9NWB7 429 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 OXSMQ9NWU1 459 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 FBXO10Q9UK96 956 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 CNOT11Q9UKZ1 510 aaKnown RBP6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 ZDHHC9Q9Y397 364 aa6.42□□□□□ -1.38
SOX2-OT-207ENST00000476964 ZNF891A8MT65 544 aaPredicted RBP6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 SLC9A1P19634 815 aa6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 EPHB4P54760 987 aa6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 CD83Q01151 205 aa6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 ZNF174Q15697 407 aa6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 TMEM200BQ69YZ2 307 aa6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 PLEKHH3Q7Z736 793 aa6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 NME9Q86XW9 330 aa6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 CALML6Q8TD86 181 aa6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 CARD11Q9BXL7 1154 aa6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 MAPRE3Q9UPY8 281 aa6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 ZKSCAN5Q9Y2L8 839 aa6.41□□□□□ -1.38
SOX2-OT-207ENST00000476964 B4GALT4O60513 344 aa6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 PRLP01236 227 aa6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 ITGB3P05106 788 aa6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 ETV4P43268 484 aa6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 PPP2CBP62714 309 aa6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 PPP2CAP67775 309 aa6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 WDR72Q3MJ13 1102 aa6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 BCL6BQ8N143 479 aaPredicted RBP6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 SMC1BQ8NDV3 1235 aa6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 E2F7Q96AV8 911 aa6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 MAML3Q96JK9 1138 aa6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 SLC4A7Q9Y6M7 1214 aa6.4□□□□□ -1.38
SOX2-OT-207ENST00000476964 A0A0G2JNJ9 132 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 TGM5O43548 720 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 PDE8AO60658 829 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 GAS7O60861 476 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 MYCLP1P12525 358 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 SYN1P17600 705 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 APEX1P27695 318 aaKnown RBP6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 SMAD3P84022 425 aaKnown RBP6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 MOGSQ13724 837 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 SKOR2Q2VWA4 1001 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 ESRP1Q6NXG1 681 aaKnown RBP6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 RNF180Q86T96 592 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 ANKRD13AQ8IZ07 590 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 EFHBQ8N7U6 833 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 CHTF18Q8WVB6 975 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 PCIF1Q9H4Z3 704 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 H2AFY2Q9P0M6 372 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 Q9UFV3 132 aa6.39□□□□□ -1.39
SOX2-OT-207ENST00000476964 LAMTOR5O43504 91 aa6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 ZNF888P0CJ79 500 aaPredicted RBP6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 SCNN1BP51168 640 aa6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 ADCY1Q08828 1119 aa6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 LRRC32Q14392 662 aa6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 USP10Q14694 798 aaKnown RBP6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 THNSL2Q86YJ6 484 aa6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 ZZZ3Q8IYH5 903 aa6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 ERCC4Q92889 916 aaPredicted RBP6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 ZMAT4Q9H898 229 aa6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 PPP4R1LQ9P1A2 415 aa6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 PTPN22Q9Y2R2 807 aa6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 SBNO2Q9Y2G9 1366 aa6.38□□□□□ -1.39
SOX2-OT-207ENST00000476964 CNOT4O95628 575 aaKnown RBP6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 RGS3P49796 1198 aa6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 SLC6A3Q01959 620 aa6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 ROM1Q03395 351 aa6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 TTC38Q5R3I4 469 aa6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 GPR158Q5T848 1215 aa6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 EGFLAMQ63HQ2 1017 aa6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 GRAMD4Q6IC98 578 aa6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 ARHGEF18Q6ZSZ5 1173 aa6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 LARP4Q71RC2 724 aaKnown RBP eCLIP6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 KANSL1Q7Z3B3 1105 aa6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 RALYLQ86SE5 291 aaKnown RBP6.37□□□□□ -1.39
SOX2-OT-207ENST00000476964 WDR48Q8TAF3 677 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms