RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 P4HBP07237 508 aaKnown RBP10.88□□□□□ -0.67
HDAC3-208ENST00000476739 RFC2P35250 354 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 QARSP47897 775 aaKnown RBP10.88□□□□□ -0.67
HDAC3-208ENST00000476739 FXR1P51114 621 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDAC3-208ENST00000476739 NPEPPSP55786 919 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 RESTQ13127 1097 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 ORC2Q13416 577 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-208ENST00000476739 DRP2Q13474 957 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 TARBP2Q15633 366 aaKnown RBP10.88□□□□□ -0.67
HDAC3-208ENST00000476739 MTERF2Q49AM1 385 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 RILPL1Q5EBL4 403 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 FAM26DQ5JW98 314 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 PSRC1Q6PGN9 363 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-208ENST00000476739 TPH2Q8IWU9 490 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 RPUSD2Q8IZ73 545 aaKnown RBP10.88□□□□□ -0.67
HDAC3-208ENST00000476739 KIAA0319LQ8IZA0 1049 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 LRRC71Q8N4P6 559 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 LINC01465Q8N7H1 131 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 HERVK_113Q902F9 699 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 FAM167AQ96KS9 214 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 PPP1R16BQ96T49 567 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 NIFKQ9BYG3 293 aaKnown RBP10.88□□□□□ -0.67
HDAC3-208ENST00000476739 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDAC3-208ENST00000476739 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 SEPT9Q9UHD8 586 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-208ENST00000476739 RBM19Q9Y4C8 960 aaKnown RBP10.88□□□□□ -0.67
HDAC3-208ENST00000476739 CDY2AQ9Y6F7 541 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 DDX11L8A8MPP1 907 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 GRXCR1A8MXD5 290 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 STX6O43752 255 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 CAND2O75155 1236 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 MED24O75448 989 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 SPATA31C1P0DKV0 1188 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 PDCP20941 246 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 CLCN3P51790 818 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 MKRN4PQ13434 485 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-208ENST00000476739 PKP1Q13835 747 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 ECM1Q16610 540 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 LRIT3Q3SXY7 679 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 XKR3Q5GH77 459 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 EFCAB12Q6NXP0 572 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 C4orf19Q8IY42 314 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 METTL13Q8N6R0 699 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 TNPO1Q92973 898 aaKnown RBP10.87□□□□□ -0.67
HDAC3-208ENST00000476739 CDHR5Q9HBB8 845 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 CEP131Q9UPN4 1083 aa10.87□□□□□ -0.67
HDAC3-208ENST00000476739 PTPRSQ13332 1948 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 PP2D1A8MPX8 630 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 VTNP04004 478 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 PFKMP08237 780 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 GHRP10912 638 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 YWHABP31946 246 aaKnown RBP10.86□□□□□ -0.67
HDAC3-208ENST00000476739 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.67
HDAC3-208ENST00000476739 MRPS6P82932 125 aaKnown RBP10.86□□□□□ -0.67
HDAC3-208ENST00000476739 ATP2C1P98194 919 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-208ENST00000476739 LPIN1Q14693 890 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 PLEKHG4Q58EX7 1191 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-208ENST00000476739 BRAPQ7Z569 592 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 TMCO2Q7Z6W1 182 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-208ENST00000476739 CATSPER3Q86XQ3 398 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 DBF4BQ8NFT6 615 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 PIGOQ8TEQ8 1089 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 TMEM40Q8WWA1 233 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 FOXD4L4Q8WXT5 416 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-208ENST00000476739 ZNF668Q96K58 619 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-208ENST00000476739 ZSWIM4Q9H7M6 989 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 AGO3Q9H9G7 860 aaKnown RBP10.86□□□□□ -0.67
HDAC3-208ENST00000476739 SUGCTQ9HAC7 445 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 CYP26B1Q9NR63 512 aa10.86□□□□□ -0.67
HDAC3-208ENST00000476739 BMP2KQ9NSY1 1161 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-208ENST00000476739 IGKV6-21A0A0C4DH24 114 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 ZBBXA8MT70 800 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 MAGEB2O15479 319 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 GPR32O75388 356 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 PARNO95453 639 aaKnown RBP10.85□□□□□ -0.67
HDAC3-208ENST00000476739 HSP90AA1P07900 732 aaKnown RBP10.85□□□□□ -0.67
HDAC3-208ENST00000476739 CDC25AP30304 524 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 PBX2P40425 430 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 DEFB103AP81534 67 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 GRIN1Q05586 938 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 TBC1D8BQ0IIM8 1120 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 SF3A1Q15459 793 aaKnown RBP10.85□□□□□ -0.67
HDAC3-208ENST00000476739 FBXO47Q5MNV8 452 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 CNKSR3Q6P9H4 555 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 POTEGQ6S5H5 508 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 RSPH3Q86UC2 560 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 IGSF22Q8N9C0 903 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 UBE2Q2Q8WVN8 375 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 CEP170P1Q96L14 293 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 CELF4Q9BZC1 486 aaKnown RBP10.85□□□□□ -0.67
HDAC3-208ENST00000476739 GINS2Q9Y248 185 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 TRPV2Q9Y5S1 764 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 CLIC4Q9Y696 253 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 ARID2Q68CP9 1835 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 GBF1Q92538 1859 aa10.85□□□□□ -0.67
HDAC3-208ENST00000476739 MICAL3Q7RTP6 2002 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 LAD1O00515 517 aa10.84□□□□□ -0.67
HDAC3-208ENST00000476739 DKC1O60832 514 aaKnown RBP eCLIP10.84□□□□□ -0.67
HDAC3-208ENST00000476739 MAFO75444 373 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms