RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PSD3Q9NYI0 1048 aa18.06■□□□□ 0.48
TMEM53-208ENST00000476724 RNF14Q9UBS8 474 aa18.06■□□□□ 0.48
TMEM53-208ENST00000476724 IGLV3-22A0A075B6J6 115 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 PDE2AO00408 941 aaPredicted RBP18.05■□□□□ 0.48
TMEM53-208ENST00000476724 CASP5P51878 434 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 SPP2Q13103 211 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 SLC18A3Q16572 532 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 C10orf76Q5T2E6 689 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 TAF3Q5VWG9 929 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 EXOC4Q96A65 974 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 OSBPL9Q96SU4 736 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 GANQ9H2C0 597 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 BHMT2Q9H2M3 363 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 GINM1Q9NU53 330 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 BZW2Q9Y6E2 419 aaKnown RBP18.05■□□□□ 0.48
TMEM53-208ENST00000476724 PARP14Q460N5 1801 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 GCOM1H8Y6P7 765 aaPredicted RBP18.05■□□□□ 0.48
TMEM53-208ENST00000476724 WDR46O15213 610 aaKnown RBP18.05■□□□□ 0.48
TMEM53-208ENST00000476724 SLC16A3O15427 465 aaKnown RBP18.05■□□□□ 0.48
TMEM53-208ENST00000476724 AFPP02771 609 aaKnown RBP18.05■□□□□ 0.48
TMEM53-208ENST00000476724 POLR2MP0CAP2 368 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 PTPRAP18433 802 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 HSP90B2PQ58FF3 399 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 KLRG1Q96E93 195 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 HSD17B14Q9BPX1 270 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 CRACR2AQ9BSW2 395 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 MED4Q9NPJ6 270 aa18.05■□□□□ 0.48
TMEM53-208ENST00000476724 H3BQF6 201 aa18.04■□□□□ 0.48
TMEM53-208ENST00000476724 XRCC5P13010 732 aaKnown RBP18.04■□□□□ 0.48
TMEM53-208ENST00000476724 PAFAH1B1P43034 410 aa18.04■□□□□ 0.48
TMEM53-208ENST00000476724 KLHL30Q0D2K2 578 aa18.04■□□□□ 0.48
TMEM53-208ENST00000476724 PPP2R5CQ13362 524 aa18.04■□□□□ 0.48
TMEM53-208ENST00000476724 ASIC2Q16515 512 aa18.04■□□□□ 0.48
TMEM53-208ENST00000476724 OTOP1Q7RTM1 612 aa18.04■□□□□ 0.48
TMEM53-208ENST00000476724 SUGCTQ9HAC7 445 aa18.04■□□□□ 0.48
TMEM53-208ENST00000476724 FBXL5Q9UKA1 691 aa18.04■□□□□ 0.48
TMEM53-208ENST00000476724 MRPL11Q9Y3B7 192 aaKnown RBP18.04■□□□□ 0.48
TMEM53-208ENST00000476724 PPP2R3BQ9Y5P8 575 aa18.04■□□□□ 0.48
TMEM53-208ENST00000476724 ADM5C9JUS6 153 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 EIF3DO15371 548 aaKnown RBP eCLIP18.03■□□□□ 0.48
TMEM53-208ENST00000476724 VCAM1P19320 739 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 RAPGEF1Q13905 1077 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 NAB2Q15742 525 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 CCNI2Q6ZMN8 369 aaPredicted RBP18.03■□□□□ 0.48
TMEM53-208ENST00000476724 FAM71BQ8TC56 605 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 LPAR1Q92633 364 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 HOOK2Q96ED9 719 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 EML1O00423 815 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 PSMD10O75832 226 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 PRPF6O94906 941 aaKnown RBP18.03■□□□□ 0.48
TMEM53-208ENST00000476724 EPB41P11171 864 aaKnown RBP18.03■□□□□ 0.48
TMEM53-208ENST00000476724 ANXA13P27216 316 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 HOXD13P35453 343 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 CYP4A11Q02928 519 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 NFIL3Q16649 462 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 CCDC181Q5TID7 509 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 KLHDC7AQ5VTJ3 777 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 RINT1Q6NUQ1 792 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 LDHDQ86WU2 507 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 CYP2W1Q8TAV3 490 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 SLC5A5Q92911 643 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 AGBL1Q96MI9 1066 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 SALL4Q9UJQ4 1053 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 ADAM21Q9UKJ8 722 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 ZNF536O15090 1300 aa18.03■□□□□ 0.48
TMEM53-208ENST00000476724 GTPBP10A4D1E9 387 aaKnown RBP18.02■□□□□ 0.48
TMEM53-208ENST00000476724 BTNL10A8MVZ5 291 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 CFBP00751 764 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 NR3C1P04150 777 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 MYBP10242 640 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 NAP1L1P55209 391 aaKnown RBP18.02■□□□□ 0.48
TMEM53-208ENST00000476724 EXOC3L4Q17RC7 722 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 LRCH2Q5VUJ6 765 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 SPATA4Q8NEY3 305 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 COG1Q8WTW3 980 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 RUSC1Q9BVN2 902 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 PICK1Q9NRD5 415 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 KCND2Q9NZV8 630 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 SEL1LQ9UBV2 794 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 ZHX2Q9Y6X8 837 aa18.02■□□□□ 0.48
TMEM53-208ENST00000476724 LRRIQ3A6PVS8 624 aaPredicted RBP18.02■□□□□ 0.47
TMEM53-208ENST00000476724 USP2O75604 605 aaPredicted RBP18.02■□□□□ 0.47
TMEM53-208ENST00000476724 SLITRK3O94933 977 aa18.02■□□□□ 0.47
TMEM53-208ENST00000476724 GCNT3O95395 438 aa18.02■□□□□ 0.47
TMEM53-208ENST00000476724 BACE1P56817 501 aa18.02■□□□□ 0.47
TMEM53-208ENST00000476724 C2orf54Q08AI8 447 aa18.02■□□□□ 0.47
TMEM53-208ENST00000476724 ZNF280CQ8ND82 737 aa18.02■□□□□ 0.47
TMEM53-208ENST00000476724 DRC1Q96MC2 740 aa18.02■□□□□ 0.47
TMEM53-208ENST00000476724 WDR18Q9BV38 432 aa18.02■□□□□ 0.47
TMEM53-208ENST00000476724 TLR10Q9BXR5 811 aa18.02■□□□□ 0.47
TMEM53-208ENST00000476724 RPAP3Q9H6T3 665 aaPredicted RBP18.02■□□□□ 0.47
TMEM53-208ENST00000476724 RGL1Q9NZL6 768 aa18.02■□□□□ 0.47
TMEM53-208ENST00000476724 OTOFQ9HC10 1997 aa18.01■□□□□ 0.47
TMEM53-208ENST00000476724 FAM13AO94988 1023 aa18.01■□□□□ 0.47
TMEM53-208ENST00000476724 AARSP49588 968 aaKnown RBP eCLIP18.01■□□□□ 0.47
TMEM53-208ENST00000476724 STXBP4Q6ZWJ1 553 aa18.01■□□□□ 0.47
TMEM53-208ENST00000476724 FAM133AQ8N9E0 248 aa18.01■□□□□ 0.47
TMEM53-208ENST00000476724 PRPF38AQ8NAV1 312 aaKnown RBP18.01■□□□□ 0.47
TMEM53-208ENST00000476724 PKNOX2Q96KN3 472 aa18.01■□□□□ 0.47
TMEM53-208ENST00000476724 SPAG5Q96R06 1193 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms