RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 CELF4Q9BZC1 486 aaKnown RBP11.5□□□□□ -0.57
CCM2-208ENST00000476594 UNC45AQ9H3U1 944 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 KDM3AQ9Y4C1 1321 aa11.5□□□□□ -0.57
CCM2-208ENST00000476594 MYH9P35579 1960 aaKnown RBP11.5□□□□□ -0.57
CCM2-208ENST00000476594 ADAMTS3O15072 1205 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 GPR182O15218 404 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 LARGE1O95461 756 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 STAG3L1P0CL83 205 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 MYOGP15173 224 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 DNM2P50570 870 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 TBC1D8BQ0IIM8 1120 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 LPIN1Q14693 890 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 XKR3Q5GH77 459 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 TRMT1LQ7Z2T5 733 aaKnown RBP11.49□□□□□ -0.57
CCM2-208ENST00000476594 CCDC83Q8IWF9 413 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 DIS3L2Q8IYB7 885 aaKnown RBP11.49□□□□□ -0.57
CCM2-208ENST00000476594 ETNPPLQ8TBG4 499 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 TRAPPC12Q8WVT3 735 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 ARNTL2Q8WYA1 636 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 TOP1MTQ969P6 601 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 C8orf76Q96K31 380 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 SCLT1Q96NL6 688 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 SEPT9Q9UHD8 586 aaPredicted RBP11.49□□□□□ -0.57
CCM2-208ENST00000476594 RWDD3Q9Y3V2 267 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 PPME1Q9Y570 386 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 GBF1Q92538 1859 aa11.49□□□□□ -0.57
CCM2-208ENST00000476594 MICAL3Q7RTP6 2002 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 MYO9BQ13459 2157 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 RPS6KA5O75582 802 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 UPP2O95045 317 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 C22orf31O95567 290 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 FDPSP14324 419 aaKnown RBP11.48□□□□□ -0.57
CCM2-208ENST00000476594 MCM2P49736 904 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 PSMC5P62195 406 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 TAP1Q03518 808 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 PPP2R5CQ13362 524 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 KRT40Q6A162 431 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 FAM117BQ6P1L5 589 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCM2-208ENST00000476594 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCM2-208ENST00000476594 KCNMB3Q9NPA1 279 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 AKT3Q9Y243 479 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 GINS2Q9Y248 185 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 COL6A3P12111 3177 aa11.48□□□□□ -0.57
CCM2-208ENST00000476594 SLC37A4O43826 429 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 NEMFO60524 1076 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 JAK2O60674 1132 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 P4HBP07237 508 aaKnown RBP11.47□□□□□ -0.57
CCM2-208ENST00000476594 CD52P31358 61 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 QARSP47897 775 aaKnown RBP11.47□□□□□ -0.57
CCM2-208ENST00000476594 CRYBB1P53674 252 aaPredicted RBP11.47□□□□□ -0.57
CCM2-208ENST00000476594 HTRA4P83105 476 aaPredicted RBP11.47□□□□□ -0.57
CCM2-208ENST00000476594 TMEM62Q0P6H9 643 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 NFX1Q12986 1120 aaKnown RBP11.47□□□□□ -0.57
CCM2-208ENST00000476594 NR5A1Q13285 461 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 ORC2Q13416 577 aaPredicted RBP11.47□□□□□ -0.57
CCM2-208ENST00000476594 EFCAB12Q6NXP0 572 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 OTUD6AQ7L8S5 288 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 NEK9Q8TD19 979 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 OXER1Q8TDS5 423 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 CCDC43Q96MW1 224 aaKnown RBP11.47□□□□□ -0.57
CCM2-208ENST00000476594 C1orf112Q9NSG2 853 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 LMCD1Q9NZU5 365 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 LRFN2Q9ULH4 789 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 NOL7Q9UMY1 257 aaKnown RBP11.47□□□□□ -0.57
CCM2-208ENST00000476594 CDH23Q9H251 3354 aa11.47□□□□□ -0.57
CCM2-208ENST00000476594 DENND3A2RUS2 1198 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 BTBD18B2RXH4 712 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 GAS2O43903 313 aaKnown RBP11.46□□□□□ -0.57
CCM2-208ENST00000476594 ZSCAN20P17040 1043 aaPredicted RBP11.46□□□□□ -0.57
CCM2-208ENST00000476594 ATP4AP20648 1035 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 ERVK-21P61565 698 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 MKRN4PQ13434 485 aaPredicted RBP11.46□□□□□ -0.57
CCM2-208ENST00000476594 EPHA7Q15375 998 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 CALCRLQ16602 461 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 PTPROQ16827 1216 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 MTERF2Q49AM1 385 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 NCAPH2Q6IBW4 605 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 NPAS4Q8IUM7 802 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 KIAA0319LQ8IZA0 1049 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 MICALL1Q8N3F8 863 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 FIBCD1Q8N539 461 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 FBXO22Q8NEZ5 403 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 SLC7A3Q8WY07 619 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 NIFKQ9BYG3 293 aaKnown RBP11.46□□□□□ -0.57
CCM2-208ENST00000476594 INO80BQ9C086 356 aaPredicted RBP11.46□□□□□ -0.57
CCM2-208ENST00000476594 FOXP1Q9H334 677 aaPredicted RBP11.46□□□□□ -0.57
CCM2-208ENST00000476594 GJB4Q9NTQ9 266 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 PADI3Q9ULW8 664 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 PCDHA12Q9UN75 941 aa11.46□□□□□ -0.57
CCM2-208ENST00000476594 ADGRA3Q8IWK6 1321 aa11.45□□□□□ -0.58
CCM2-208ENST00000476594 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.45□□□□□ -0.58
CCM2-208ENST00000476594 LCHNA4D1U4 455 aa11.45□□□□□ -0.58
CCM2-208ENST00000476594 LINC01553A4QN01 128 aa11.45□□□□□ -0.58
CCM2-208ENST00000476594 DDX11L8A8MPP1 907 aa11.45□□□□□ -0.58
CCM2-208ENST00000476594 ZBTB42B2RXF5 422 aa11.45□□□□□ -0.58
CCM2-208ENST00000476594 ENPP3O14638 875 aa11.45□□□□□ -0.58
CCM2-208ENST00000476594 EDIL3O43854 480 aa11.45□□□□□ -0.58
CCM2-208ENST00000476594 ZNF862O60290 1169 aa11.45□□□□□ -0.58
CCM2-208ENST00000476594 POU3F3P20264 500 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms