RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 SAGE1Q9NXZ1 904 aa13.72□□□□□ -0.21
CDKAL1-203ENST00000476517 LIMA1Q9UHB6 759 aaKnown RBP13.72□□□□□ -0.21
CDKAL1-203ENST00000476517 ZKSCAN5Q9Y2L8 839 aa13.72□□□□□ -0.21
CDKAL1-203ENST00000476517 IGSF9BQ9UPX0 1349 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 A0A1B0GTH6 734 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 PGK2P07205 417 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 SLC10A3P09131 477 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 SUPT20HL2P0C7V6 817 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 MAPK4P31152 587 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 RARRES1P49788 294 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 FXR1P51114 621 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 ACTR2P61160 394 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 NOGQ13253 232 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 TCP11X2Q5H9J9 407 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 MORC4Q8TE76 937 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 HPS3Q969F9 1004 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 MRPL44Q9H9J2 332 aaKnown RBP13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 EFCC1Q9HA90 598 aa13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 WRAP73Q9P2S5 460 aaPredicted RBP13.71□□□□□ -0.21
CDKAL1-203ENST00000476517 ESPNB1AK53 854 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 BACH1O14867 736 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 EIF3DO15371 548 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 UBA1P22314 1058 aaKnown RBP13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 PTGS1P23219 599 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 PMS1P54277 932 aaKnown RBP13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 INHBEP58166 350 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 SREBF2Q12772 1141 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 ALCAMQ13740 583 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 UGCGQ16739 394 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 XKR9Q5GH70 373 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 FAM160B1Q5W0V3 765 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 ANKRD40Q6AI12 368 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 CCDC186Q7Z3E2 898 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 FILIP1Q7Z7B0 1213 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 VSTM4Q8IW00 320 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 MYCT1Q8N699 235 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 SLC17A8Q8NDX2 589 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 FGD4Q96M96 766 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 DRC1Q96MC2 740 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 SRRTQ9BXP5 876 aaKnown RBP13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 SLC5A4Q9NY91 659 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 TBC1D7Q9P0N9 293 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 GABBR1Q9UBS5 961 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 PCDHA2Q9Y5H9 948 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 CEP290O15078 2479 aa13.7□□□□□ -0.22
CDKAL1-203ENST00000476517 TRIOBPQ9H2D6 2365 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 ZSWIM8A7E2V4 1837 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 RSPH10B2B2RC85 870 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 FARP2O94887 1054 aaPredicted RBP13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 GCNT3O95395 438 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 RSPH10BP0C881 870 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 ADORA2AP29274 412 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 ZNF131P52739 623 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 COPB1P53618 953 aaKnown RBP13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 SP4Q02446 784 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 KRT31Q15323 416 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 LRRC41Q15345 812 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 TAF1CQ15572 869 aaPredicted RBP13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 BMT2Q1RMZ1 405 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 ABHD15Q6UXT9 468 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 CYFIP1Q7L576 1253 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 FAM178BQ8IXR5 827 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 CCDC102AQ96A19 550 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 CNOT6LQ96LI5 555 aaKnown RBP13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 CEP63Q96MT8 703 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 DUSP9Q99956 384 aaKnown RBP13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 SEMA6BQ9H3T3 888 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 VTA1Q9NP79 307 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 ZNF302Q9NR11 478 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 LARSQ9P2J5 1176 aaKnown RBP13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 SEPT9Q9UHD8 586 aaPredicted RBP13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 DOCK3Q8IZD9 2030 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 KAT6AQ92794 2004 aa13.69□□□□□ -0.22
CDKAL1-203ENST00000476517 ITIH6Q6UXX5 1313 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 ADGRA2Q96PE1 1338 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 N4BP3O15049 544 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 CALUO43852 315 aaPredicted RBP13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 USO1O60763 962 aaKnown RBP13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 COBLO75128 1261 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 HIP1RO75146 1068 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 ATG7O95352 703 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 GGPS1O95749 300 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 GNA14O95837 355 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 TPM1P09493 284 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 MAPTP10636 758 aaKnown RBP13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 MTIF2P46199 727 aaKnown RBP13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 FKBP3Q00688 224 aaKnown RBP13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 PRKCEQ02156 737 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 GRB14Q14449 540 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 TTLL4Q14679 1199 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 EDRF1Q3B7T1 1238 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 ZNF792Q3KQV3 632 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 SPECC1LQ69YQ0 1117 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 SWSAP1Q6NVH7 229 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 ARMCX2Q7L311 632 aa13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 EPM2AIP1Q7L775 607 aaPredicted RBP13.68□□□□□ -0.22
CDKAL1-203ENST00000476517 EEPD1Q7L9B9 569 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms