RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TRIM58Q8NG06 486 aa18.27■□□□□ 0.51
TVP23B-202ENST00000476139 CAGE1Q8TC20 777 aa18.27■□□□□ 0.51
TVP23B-202ENST00000476139 COG1Q8WTW3 980 aa18.27■□□□□ 0.51
TVP23B-202ENST00000476139 FIZ1Q96SL8 496 aa18.27■□□□□ 0.51
TVP23B-202ENST00000476139 VPS33BQ9H267 617 aa18.27■□□□□ 0.51
TVP23B-202ENST00000476139 ADAM21Q9UKJ8 722 aa18.27■□□□□ 0.51
TVP23B-202ENST00000476139 A0A087X0T9 212 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 ERLIN1O75477 346 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 FAM228BP0C875 321 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 PON1P27169 355 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 HSD17B4P51659 736 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 HNRNPH2P55795 449 aaKnown RBP18.26■□□□□ 0.51
TVP23B-202ENST00000476139 B3GNT9Q6UX72 402 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 DNAAF5Q86Y56 855 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 CCDC102AQ96A19 550 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 TAOK3Q9H2K8 898 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 PARVGQ9HBI0 331 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 FZD1Q9UP38 647 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 JRKLQ9Y4A0 524 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 MYH10P35580 1976 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 NCK2O43639 380 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 AFPP02771 609 aaKnown RBP18.26■□□□□ 0.51
TVP23B-202ENST00000476139 LMAN1P49257 510 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 CASP8Q14790 479 aa18.26■□□□□ 0.51
TVP23B-202ENST00000476139 LRRIQ3A6PVS8 624 aaPredicted RBP18.25■□□□□ 0.51
TVP23B-202ENST00000476139 TACC1O75410 805 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 UCHL3P15374 230 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 PLS1Q14651 629 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 SYN2Q92777 582 aaPredicted RBP18.25■□□□□ 0.51
TVP23B-202ENST00000476139 SLC35C1Q96A29 364 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 NACC1Q96RE7 527 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 TEKT3Q9BXF9 490 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 EHMT1Q9H9B1 1298 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 ZMYM2Q9UBW7 1377 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 ANO9A1A5B4 782 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 NAP1L1P55209 391 aaKnown RBP18.25■□□□□ 0.51
TVP23B-202ENST00000476139 KLHL30Q0D2K2 578 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 EXOC3L4Q17RC7 722 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 DALRD3Q5D0E6 543 aaKnown RBP18.25■□□□□ 0.51
TVP23B-202ENST00000476139 PRAMEF18Q5VWM3 479 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 ZNF720Q7Z2F6 126 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 PACSIN1Q9BY11 444 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 SMARCAL1Q9NZC9 954 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 SNX12Q9UMY4 172 aa18.25■□□□□ 0.51
TVP23B-202ENST00000476139 NFKBIEO00221 500 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 MATR3P43243 847 aaKnown RBP eCLIP18.24■□□□□ 0.511e-6■■■■□ 24.8
TVP23B-202ENST00000476139 TNNT3P45378 269 aaPredicted RBP18.24■□□□□ 0.51
TVP23B-202ENST00000476139 MRPS9P82933 396 aaKnown RBP18.24■□□□□ 0.51
TVP23B-202ENST00000476139 EPHA7Q15375 998 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 TBC1D10BQ4KMP7 808 aaPredicted RBP18.24■□□□□ 0.51
TVP23B-202ENST00000476139 ODR4Q5SWX8 454 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 NFRKBQ6P4R8 1299 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 GJB7Q6PEY0 223 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 CREG2Q8IUH2 290 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 HNRNPLLQ8WVV9 542 aaKnown RBP18.24■□□□□ 0.51
TVP23B-202ENST00000476139 AIPL1Q9NZN9 384 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 AJAP1Q9UKB5 411 aaPredicted RBP18.24■□□□□ 0.51
TVP23B-202ENST00000476139 POTEB2H3BUK9 544 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 FLOT1O75955 427 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 RPL13P26373 211 aaKnown RBP18.24■□□□□ 0.51
TVP23B-202ENST00000476139 C2orf54Q08AI8 447 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 MTMR2Q13614 643 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 KLHDC7AQ5VTJ3 777 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 FAM178BQ8IXR5 827 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 RBM46Q8TBY0 533 aaKnown RBP18.24■□□□□ 0.51
TVP23B-202ENST00000476139 NUCKS1Q9H1E3 243 aaKnown RBP18.24■□□□□ 0.51
TVP23B-202ENST00000476139 FAN1Q9Y2M0 1017 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 RBAK-RBAKDNI3L0D1 243 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 DHX15O43143 795 aaKnown RBP18.24■□□□□ 0.51
TVP23B-202ENST00000476139 GAP43P17677 238 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 SETQ01105 290 aaPredicted RBP18.24■□□□□ 0.51
TVP23B-202ENST00000476139 PTK2Q05397 1052 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 ITGB3BPQ13352 177 aaPredicted RBP18.24■□□□□ 0.51
TVP23B-202ENST00000476139 ARHGAP27Q6ZUM4 889 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 IRF2BP2Q7Z5L9 587 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 BORCS6Q96GS4 357 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 WNK4Q96J92 1243 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 EHD2Q9NZN4 543 aa18.24■□□□□ 0.51
TVP23B-202ENST00000476139 PJA2O43164 708 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 EPB41P11171 864 aaKnown RBP18.23■□□□□ 0.51
TVP23B-202ENST00000476139 EIF2AK2P19525 551 aaKnown RBP18.23■□□□□ 0.51
TVP23B-202ENST00000476139 TUBB4BP68371 445 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 SLC16A10Q8TF71 515 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 TAAR1Q96RJ0 339 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 SAMM50Q9Y512 469 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 CCDC66A2RUB6 948 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 TMEM150BA6NC51 233 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 KLRC1P26715 233 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 DNA2P51530 1060 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 SLC18A3Q16572 532 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 NBPF12Q5TAG4 269 aaPredicted RBP18.23■□□□□ 0.51
TVP23B-202ENST00000476139 DAW1Q8N136 415 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 RDH13Q8NBN7 331 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 SPAG5Q96R06 1193 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 DEFB129Q9H1M3 183 aa18.23■□□□□ 0.51
TVP23B-202ENST00000476139 WDR46O15213 610 aaKnown RBP18.22■□□□□ 0.51
TVP23B-202ENST00000476139 USP14P54578 494 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 RPS6P62753 249 aaKnown RBP18.22■□□□□ 0.51
TVP23B-202ENST00000476139 MICALL2Q8IY33 904 aa18.22■□□□□ 0.51
TVP23B-202ENST00000476139 KIAA1683Q9H0B3 1180 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms