RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 TBCKQ8TEA7 893 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 C22orf23Q9BZE7 217 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 WDR81Q562E7 1941 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 COL4A4P53420 1690 aaPredicted RBP10.67□□□□□ -0.7
PDPN-204ENST00000475043 IGKV6D-21A0A0A0MT36 114 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 PFKFB2O60825 505 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 ARHGEF15O94989 841 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 PSAPP07602 524 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 XBP1P17861 261 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 CIITAP33076 1130 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 USP11P51784 963 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 NEK4P51957 841 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 KRT76Q01546 638 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 IER5Q5VY09 327 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 ZNF746Q6NUN9 644 aaPredicted RBP10.67□□□□□ -0.7
PDPN-204ENST00000475043 RPAINQ86UA6 219 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 SMAP1Q8IYB5 467 aaPredicted RBP10.67□□□□□ -0.7
PDPN-204ENST00000475043 USP38Q8NB14 1042 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 APBB2Q92870 758 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 RAD9AQ99638 391 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 MTUS1Q9ULD2 1270 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 KCNJ14Q9UNX9 436 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 INSL6Q9Y581 213 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 PCDHA10Q9Y5I2 948 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 CDY2AQ9Y6F7 541 aa10.67□□□□□ -0.7
PDPN-204ENST00000475043 MSH4O15457 936 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 CHMP2AO43633 222 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 HBP1O60381 514 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 GAS7O60861 476 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 RPLP2P05387 115 aaKnown RBP10.66□□□□□ -0.7
PDPN-204ENST00000475043 KLRC1P26715 233 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 MRPS6P82932 125 aaKnown RBP10.66□□□□□ -0.7
PDPN-204ENST00000475043 MGAT3Q09327 533 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 LPIN1Q14693 890 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 NONOQ15233 471 aaKnown RBP eCLIP10.66□□□□□ -0.7
PDPN-204ENST00000475043 LRCH2Q5VUJ6 765 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 GALNT17Q6IS24 598 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 MTHFD1LQ6UB35 978 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 SPRED2Q7Z698 418 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 NECAB1Q8N987 351 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 ATP8B4Q8TF62 1192 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 LENG9Q96B70 501 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 YME1L1Q96TA2 773 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 GABBR1Q9UBS5 961 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 GINS2Q9Y248 185 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 PCDHA2Q9Y5H9 948 aa10.66□□□□□ -0.7
PDPN-204ENST00000475043 CHD9Q3L8U1 2897 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 STK36Q9NRP7 1315 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 UNC80Q8N2C7 3258 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 CCDC194A0A1B0GVG4 234 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 SMIM35A0A1B0GVV1 85 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.65□□□□□ -0.7
PDPN-204ENST00000475043 LINC01553A4QN01 128 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 EPOPA6NHQ4 379 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 WDR64B1ANS9 1081 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 M0R2N6 131 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 TDP2O95551 362 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 SKIV2LQ15477 1246 aaKnown RBP10.65□□□□□ -0.7
PDPN-204ENST00000475043 INF2Q27J81 1249 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 ZNF484Q5JVG2 852 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 FBXO47Q5MNV8 452 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 TSHZ1Q6ZSZ6 1077 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 KRT25Q7Z3Z0 450 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 FAM177A1Q8N128 213 aaPredicted RBP10.65□□□□□ -0.7
PDPN-204ENST00000475043 DAGLBQ8NCG7 672 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 BBXQ8WY36 941 aaPredicted RBP10.65□□□□□ -0.7
PDPN-204ENST00000475043 WASF1Q92558 559 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 GJA10Q969M2 543 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 TOP1MTQ969P6 601 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 DDX27Q96GQ7 796 aaKnown RBP10.65□□□□□ -0.7
PDPN-204ENST00000475043 RIT2Q99578 217 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 PHF20Q9BVI0 1012 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 TEKT3Q9BXF9 490 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 PRDM6Q9NQX0 595 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 DISC1Q9NRI5 854 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 GJB4Q9NTQ9 266 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 ORC3Q9UBD5 711 aaPredicted RBP10.65□□□□□ -0.7
PDPN-204ENST00000475043 MAFBQ9Y5Q3 323 aaPredicted RBP10.65□□□□□ -0.7
PDPN-204ENST00000475043 TRPV2Q9Y5S1 764 aa10.65□□□□□ -0.7
PDPN-204ENST00000475043 EVPLQ92817 2033 aa10.65□□□□□ -0.71
PDPN-204ENST00000475043 COL1A2P08123 1366 aa10.65□□□□□ -0.71
PDPN-204ENST00000475043 NLRC5Q86WI3 1866 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 EDIL3O43854 480 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 LARGE1O95461 756 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 CTDNEP1O95476 244 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 ATP4AP20648 1035 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 CD52P31358 61 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 SFNP31947 248 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 GRB10Q13322 594 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 NPY5RQ15761 445 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 ME3Q16798 604 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 LETM2Q2VYF4 491 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 Q4G0T1 1027 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 KRT40Q6A162 431 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 ADGRD1Q6QNK2 874 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 NME8Q8N427 588 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 METTL13Q8N6R0 699 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 GDPD5Q8WTR4 605 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 SLC5A5Q92911 643 aa10.64□□□□□ -0.71
PDPN-204ENST00000475043 GTF3C6Q969F1 213 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms