RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 HLA-CQ95604 372 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
CLIP2-204ENST00000474962 AIFM3Q96NN9 605 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 LMCD1Q9NZU5 365 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 PCDHA4Q9UN74 947 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 PCDHA2Q9Y5H9 948 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 TCF20Q9UGU0 1960 aaKnown RBP13.4□□□□□ -0.26
CLIP2-204ENST00000474962 IGKV6D-21A0A0A0MT36 114 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 H3BQV1 296 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 IPO5O00410 1097 aaKnown RBP13.4□□□□□ -0.26
CLIP2-204ENST00000474962 BACH1O14867 736 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 EDIL3O43854 480 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 ATP4AP20648 1035 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 PDCP20941 246 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 KLRC1P26715 233 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 CD52P31358 61 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 ANP32AP39687 249 aaKnown RBP13.4□□□□□ -0.26
CLIP2-204ENST00000474962 MRPS6P82932 125 aaKnown RBP13.4□□□□□ -0.26
CLIP2-204ENST00000474962 IER5Q5VY09 327 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 MTHFD1LQ6UB35 978 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 BLIDQ8IZY5 108 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 FBXO22Q8NEZ5 403 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 UHRF1Q96T88 793 aaPredicted RBP13.4□□□□□ -0.26
CLIP2-204ENST00000474962 KCNJ14Q9UNX9 436 aa13.4□□□□□ -0.26
CLIP2-204ENST00000474962 KRT2P35908 639 aa13.39□□□□□ -0.27
CLIP2-204ENST00000474962 PRR16Q569H4 304 aa13.39□□□□□ -0.27
CLIP2-204ENST00000474962 LARP1BQ659C4 914 aaKnown RBP13.39□□□□□ -0.27
CLIP2-204ENST00000474962 TRMT1LQ7Z2T5 733 aaKnown RBP13.39□□□□□ -0.27
CLIP2-204ENST00000474962 CCDC60Q8IWA6 550 aaPredicted RBP13.39□□□□□ -0.27
CLIP2-204ENST00000474962 TMEM192Q8IY95 271 aa13.39□□□□□ -0.27
CLIP2-204ENST00000474962 TNPO1Q92973 898 aaKnown RBP13.39□□□□□ -0.27
CLIP2-204ENST00000474962 ZNF577Q9BSK1 485 aa13.39□□□□□ -0.27
CLIP2-204ENST00000474962 PHF20Q9BVI0 1012 aa13.39□□□□□ -0.27
CLIP2-204ENST00000474962 CDHR5Q9HBB8 845 aa13.39□□□□□ -0.27
CLIP2-204ENST00000474962 COG5Q9UP83 839 aa13.39□□□□□ -0.27
CLIP2-204ENST00000474962 SSUH2Q9Y2M2 353 aa13.39□□□□□ -0.27
CLIP2-204ENST00000474962 C5orf42Q9H799 3197 aa13.39□□□□□ -0.27
CLIP2-204ENST00000474962 MICAL3Q7RTP6 2002 aa13.39□□□□□ -0.27
CLIP2-204ENST00000474962 BRWD1Q9NSI6 2320 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 CCDC194A0A1B0GVG4 234 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 ZBTB42B2RXF5 422 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 GUCY1B3Q02153 619 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 GPM6BQ13491 265 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 AAK1Q2M2I8 961 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 PDXDC2PQ6P474 469 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 TSHZ1Q6ZSZ6 1077 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 KIAA0319LQ8IZA0 1049 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 SPRYD3Q8NCJ5 442 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 CELF4Q9BZC1 486 aaKnown RBP13.38□□□□□ -0.27
CLIP2-204ENST00000474962 ZNF302Q9NR11 478 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 PADI3Q9ULW8 664 aa13.38□□□□□ -0.27
CLIP2-204ENST00000474962 MYO7AQ13402 2215 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 SMIM35A0A1B0GVV1 85 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 H3BNC9 293 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 HBP1O60381 514 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 MMP1P03956 469 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 CIITAP33076 1130 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 SLC26A2P50443 739 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 KRT76Q01546 638 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 TMEM266Q2M3C6 531 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 FAM160B1Q5W0V3 765 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 MIS18BP1Q6P0N0 1132 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 KRT25Q7Z3Z0 450 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 CKAP2LQ8IYA6 745 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 CRIPAKQ8N1N5 446 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 NME8Q8N427 588 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 FIBCD1Q8N539 461 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 DAGLBQ8NCG7 672 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 FBXO18Q8NFZ0 1043 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 ATP8B4Q8TF62 1192 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 LINC01599Q8WXQ3 324 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 GJA10Q969M2 543 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 LENG9Q96B70 501 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 GJB4Q9NTQ9 266 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 TBC1D22BQ9NU19 505 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 GINS2Q9Y248 185 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 TRPV2Q9Y5S1 764 aa13.37□□□□□ -0.27
CLIP2-204ENST00000474962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.36□□□□□ -0.27
CLIP2-204ENST00000474962 MSH4O15457 936 aa13.36□□□□□ -0.27
CLIP2-204ENST00000474962 LINC00271P0C7V0 271 aa13.36□□□□□ -0.27
CLIP2-204ENST00000474962 BMPR1AP36894 532 aa13.36□□□□□ -0.27
CLIP2-204ENST00000474962 NONOQ15233 471 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLIP2-204ENST00000474962 ZNF746Q6NUN9 644 aaPredicted RBP13.36□□□□□ -0.27
CLIP2-204ENST00000474962 DIS3L2Q8IYB7 885 aaKnown RBP13.36□□□□□ -0.27
CLIP2-204ENST00000474962 MRPL38Q96DV4 380 aaKnown RBP13.36□□□□□ -0.27
CLIP2-204ENST00000474962 TMX1Q9H3N1 280 aa13.36□□□□□ -0.27
CLIP2-204ENST00000474962 PCDHA10Q9Y5I2 948 aa13.36□□□□□ -0.27
CLIP2-204ENST00000474962 MAFBQ9Y5Q3 323 aaPredicted RBP13.36□□□□□ -0.27
CLIP2-204ENST00000474962 SQORQ9Y6N5 450 aa13.36□□□□□ -0.27
CLIP2-204ENST00000474962 IGSF9BQ9UPX0 1349 aa13.36□□□□□ -0.27
CLIP2-204ENST00000474962 M0QZ92 97 aa13.35□□□□□ -0.27
CLIP2-204ENST00000474962 DGKIO75912 1065 aa13.35□□□□□ -0.27
CLIP2-204ENST00000474962 RPLP2P05387 115 aaKnown RBP13.35□□□□□ -0.27
CLIP2-204ENST00000474962 PDIA4P13667 645 aaKnown RBP13.35□□□□□ -0.27
CLIP2-204ENST00000474962 VASPP50552 380 aaPredicted RBP13.35□□□□□ -0.27
CLIP2-204ENST00000474962 USP11P51784 963 aa13.35□□□□□ -0.27
CLIP2-204ENST00000474962 NFX1Q12986 1120 aaKnown RBP13.35□□□□□ -0.27
CLIP2-204ENST00000474962 ZNF484Q5JVG2 852 aa13.35□□□□□ -0.27
CLIP2-204ENST00000474962 METTL13Q8N6R0 699 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms