RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 TMEM199Q8N511 208 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 KCTD17Q8N5Z5 321 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 TRAPPC12Q8WVT3 735 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 RAB34Q9BZG1 259 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 ANKEF1Q9NU02 776 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 LRWD1Q9UFC0 647 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 CLIC4Q9Y696 253 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 A0A1W2PPC1 479 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 SLC26A4O43511 780 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 MED24O75448 989 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 FPGSQ05932 587 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 MGAT3Q09327 533 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 MBTPS1Q14703 1052 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 SLC39A14Q15043 492 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 HYIQ5T013 277 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 ZNF618Q5T7W0 954 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 LRRC8DQ7L1W4 858 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 CKAP2LQ8IYA6 745 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 KIAA0319LQ8IZA0 1049 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 AK8Q96MA6 479 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 USP28Q96RU2 1077 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 LBHD1Q9BQE6 289 aaPredicted RBP18.97■□□□□ 0.63
SCAF11-206ENST00000474828 MMTAG2Q9BU76 263 aaKnown RBP18.97■□□□□ 0.63
SCAF11-206ENST00000474828 PPP1R12CQ9BZL4 782 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 KDM3AQ9Y4C1 1321 aa18.97■□□□□ 0.63
SCAF11-206ENST00000474828 MAFO75444 373 aaPredicted RBP18.96■□□□□ 0.63
SCAF11-206ENST00000474828 PFKMP08237 780 aa18.96■□□□□ 0.63
SCAF11-206ENST00000474828 CSF2RAP15509 400 aa18.96■□□□□ 0.63
SCAF11-206ENST00000474828 YWHABP31946 246 aaKnown RBP18.96■□□□□ 0.63
SCAF11-206ENST00000474828 EPHB4P54760 987 aa18.96■□□□□ 0.63
SCAF11-206ENST00000474828 PPIGQ13427 754 aaKnown RBP eCLIP18.96■□□□□ 0.635e-9■■■□□ 18.1
SCAF11-206ENST00000474828 CTTNQ14247 550 aaKnown RBP18.96■□□□□ 0.63
SCAF11-206ENST00000474828 ZNF710Q8N1W2 664 aa18.96■□□□□ 0.63
SCAF11-206ENST00000474828 RETREG2Q8NC44 543 aa18.96■□□□□ 0.63
SCAF11-206ENST00000474828 SPRYD3Q8NCJ5 442 aa18.96■□□□□ 0.63
SCAF11-206ENST00000474828 ERMNQ8TAM6 284 aa18.96■□□□□ 0.63
SCAF11-206ENST00000474828 FTOQ9C0B1 505 aaKnown RBP eCLIP18.96■□□□□ 0.63
SCAF11-206ENST00000474828 DHX33Q9H6R0 707 aaKnown RBP18.96■□□□□ 0.63
SCAF11-206ENST00000474828 IL23AQ9NPF7 189 aa18.96■□□□□ 0.63
SCAF11-206ENST00000474828 CYP26B1Q9NR63 512 aa18.96■□□□□ 0.63
SCAF11-206ENST00000474828 SQORQ9Y6N5 450 aa18.96■□□□□ 0.63
SCAF11-206ENST00000474828 IGBP1P78318 339 aa18.95■□□□□ 0.62
SCAF11-206ENST00000474828 MDM2Q00987 491 aaPredicted RBP18.95■□□□□ 0.62
SCAF11-206ENST00000474828 CYP4A11Q02928 519 aa18.95■□□□□ 0.62
SCAF11-206ENST00000474828 RASIP1Q5U651 963 aa18.95■□□□□ 0.62
SCAF11-206ENST00000474828 HAUS3Q68CZ6 603 aa18.95■□□□□ 0.62
SCAF11-206ENST00000474828 FAM43BQ6ZT52 329 aaPredicted RBP18.95■□□□□ 0.62
SCAF11-206ENST00000474828 OTUD6AQ7L8S5 288 aa18.95■□□□□ 0.62
SCAF11-206ENST00000474828 EXOC8Q8IYI6 725 aa18.95■□□□□ 0.62
SCAF11-206ENST00000474828 ZBTB10Q96DT7 871 aa18.95■□□□□ 0.62
SCAF11-206ENST00000474828 FBXO2Q9UK22 296 aaPredicted RBP18.95■□□□□ 0.62
SCAF11-206ENST00000474828 DBR1Q9UK59 544 aaKnown RBP18.95■□□□□ 0.62
SCAF11-206ENST00000474828 SRPRBQ9Y5M8 271 aaKnown RBP18.95■□□□□ 0.62
SCAF11-206ENST00000474828 KAT6AQ92794 2004 aa18.95■□□□□ 0.62
SCAF11-206ENST00000474828 MYH15Q9Y2K3 1946 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 TMEM150BA6NC51 233 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 DDX11L8A8MPP1 907 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 ZBTB39O15060 712 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 CHRNA1P02708 482 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 LONP1P36776 959 aaKnown RBP18.94■□□□□ 0.62
SCAF11-206ENST00000474828 THPOP40225 353 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 CCL23P55773 120 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 MKRN4PQ13434 485 aaPredicted RBP18.94■□□□□ 0.62
SCAF11-206ENST00000474828 RSPH3Q86UC2 560 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 TPH2Q8IWU9 490 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 ZNF579Q8NAF0 562 aaKnown RBP18.94■□□□□ 0.62
SCAF11-206ENST00000474828 LINC00301Q8NCQ3 95 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 DNAJB3Q8WWF6 145 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 NACC1Q96RE7 527 aa18.94■□□□□ 0.62
SCAF11-206ENST00000474828 SEPT9Q9UHD8 586 aaPredicted RBP18.94■□□□□ 0.62
SCAF11-206ENST00000474828 RSPH10B2B2RC85 870 aa18.93■□□□□ 0.62
SCAF11-206ENST00000474828 NBNO60934 754 aa18.93■□□□□ 0.62
SCAF11-206ENST00000474828 YEATS4O95619 227 aa18.93■□□□□ 0.62
SCAF11-206ENST00000474828 RSPH10BP0C881 870 aa18.93■□□□□ 0.62
SCAF11-206ENST00000474828 RFC5P40937 340 aa18.93■□□□□ 0.62
SCAF11-206ENST00000474828 RARRES1P49788 294 aa18.93■□□□□ 0.62
SCAF11-206ENST00000474828 NPEPPSP55786 919 aa18.93■□□□□ 0.62
SCAF11-206ENST00000474828 ECM1Q16610 540 aa18.93■□□□□ 0.62
SCAF11-206ENST00000474828 TMEM240Q5SV17 173 aa18.93■□□□□ 0.62
SCAF11-206ENST00000474828 RPUSD2Q8IZ73 545 aaKnown RBP18.93■□□□□ 0.62
SCAF11-206ENST00000474828 SCLYQ96I15 445 aa18.93■□□□□ 0.62
SCAF11-206ENST00000474828 ZNF396Q96N95 335 aaPredicted RBP18.93■□□□□ 0.62
SCAF11-206ENST00000474828 JPH2Q9BR39 696 aaPredicted RBP18.93■□□□□ 0.62
SCAF11-206ENST00000474828 TRIOBPQ9H2D6 2365 aa18.92■□□□□ 0.62
SCAF11-206ENST00000474828 VWA3AA6NCI4 1184 aa18.92■□□□□ 0.62
SCAF11-206ENST00000474828 PP2D1A8MPX8 630 aa18.92■□□□□ 0.62
SCAF11-206ENST00000474828 GAS2O43903 313 aaKnown RBP18.92■□□□□ 0.62
SCAF11-206ENST00000474828 PPP6R2O75170 966 aa18.92■□□□□ 0.62
SCAF11-206ENST00000474828 MRPS6P82932 125 aaKnown RBP18.92■□□□□ 0.62
SCAF11-206ENST00000474828 GRIN1Q05586 938 aa18.92■□□□□ 0.62
SCAF11-206ENST00000474828 TBC1D8BQ0IIM8 1120 aa18.92■□□□□ 0.62
SCAF11-206ENST00000474828 IER5Q5VY09 327 aa18.92■□□□□ 0.62
SCAF11-206ENST00000474828 KRT79Q5XKE5 535 aa18.92■□□□□ 0.62
SCAF11-206ENST00000474828 PLA2G4FQ68DD2 849 aa18.92■□□□□ 0.62
SCAF11-206ENST00000474828 CEP170P1Q96L14 293 aa18.92■□□□□ 0.62
SCAF11-206ENST00000474828 LAMA3Q16787 3333 aa18.92■□□□□ 0.62
SCAF11-206ENST00000474828 ARID2Q68CP9 1835 aa18.91■□□□□ 0.62
SCAF11-206ENST00000474828 GPR32O75388 356 aa18.91■□□□□ 0.62
SCAF11-206ENST00000474828 MTERF2Q49AM1 385 aa18.91■□□□□ 0.62
SCAF11-206ENST00000474828 PLEKHG4Q58EX7 1191 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms