RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CTNNB1P35222 781 aa23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 BTG3Q14201 252 aaPredicted RBP23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 GALNT17Q6IS24 598 aa23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 KIAA0319LQ8IZA0 1049 aa23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 LENG9Q96B70 501 aa23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 RIT2Q99578 217 aa23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 C11orf84Q9BUA3 381 aaPredicted RBP23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 UPF3BQ9BZI7 483 aaKnown RBP23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 RC3H2Q9HBD1 1191 aaKnown RBP23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 PDRG1Q9NUG6 133 aa23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 RNF216Q9NWF9 866 aaPredicted RBP23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 PCDHA4Q9UN74 947 aa23.04■■□□□ 1.28
PDLIM4-206ENST00000474421 DGKIO75912 1065 aa23.03■■□□□ 1.28
PDLIM4-206ENST00000474421 ATP4AP20648 1035 aa23.03■■□□□ 1.28
PDLIM4-206ENST00000474421 BMPR1AP36894 532 aa23.03■■□□□ 1.28
PDLIM4-206ENST00000474421 NPAS4Q8IUM7 802 aa23.03■■□□□ 1.28
PDLIM4-206ENST00000474421 LINC01599Q8WXQ3 324 aa23.03■■□□□ 1.28
PDLIM4-206ENST00000474421 CLP1Q92989 425 aaKnown RBP23.03■■□□□ 1.28
PDLIM4-206ENST00000474421 ZNF689Q96CS4 500 aaPredicted RBP23.03■■□□□ 1.28
PDLIM4-206ENST00000474421 GABBR1Q9UBS5 961 aa23.03■■□□□ 1.28
PDLIM4-206ENST00000474421 ZBTB42B2RXF5 422 aa23.02■■□□□ 1.28
PDLIM4-206ENST00000474421 MAGEB2O15479 319 aa23.02■■□□□ 1.28
PDLIM4-206ENST00000474421 CDKL5O76039 1030 aa23.02■■□□□ 1.28
PDLIM4-206ENST00000474421 SFNP31947 248 aa23.02■■□□□ 1.28
PDLIM4-206ENST00000474421 ZNF710Q8N1W2 664 aa23.02■■□□□ 1.28
PDLIM4-206ENST00000474421 BANK1Q8NDB2 785 aa23.02■■□□□ 1.28
PDLIM4-206ENST00000474421 LMAN2LQ9H0V9 348 aa23.02■■□□□ 1.28
PDLIM4-206ENST00000474421 UBE2ZQ9H832 354 aaPredicted RBP23.02■■□□□ 1.28
PDLIM4-206ENST00000474421 GINS2Q9Y248 185 aa23.02■■□□□ 1.28
PDLIM4-206ENST00000474421 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 MSH4O15457 936 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 GAS7O60861 476 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 RPS6KA5O75582 802 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 C22orf31O95567 290 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 NFX1Q12986 1120 aaKnown RBP23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 ERICH6BQ5W0A0 696 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 RTN4RL1Q86UN2 441 aaPredicted RBP23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 CMTR2Q8IYT2 770 aaKnown RBP23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 BLIDQ8IZY5 108 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 DAGLBQ8NCG7 672 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 TBCKQ8TEA7 893 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 PLVAPQ9BX97 442 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 DISC1Q9NRI5 854 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 NRBP2Q9NSY0 501 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 PPP4R2Q9NY27 417 aa23.01■■□□□ 1.27
PDLIM4-206ENST00000474421 GPR182O15218 404 aa23■■□□□ 1.27
PDLIM4-206ENST00000474421 JAK3P52333 1124 aa23■■□□□ 1.27
PDLIM4-206ENST00000474421 STK3Q13188 491 aa23■■□□□ 1.27
PDLIM4-206ENST00000474421 Q4G0T1 1027 aa23■■□□□ 1.27
PDLIM4-206ENST00000474421 LRCH2Q5VUJ6 765 aa23■■□□□ 1.27
PDLIM4-206ENST00000474421 CRIPAKQ8N1N5 446 aa23■■□□□ 1.27
PDLIM4-206ENST00000474421 METTL13Q8N6R0 699 aa23■■□□□ 1.27
PDLIM4-206ENST00000474421 SLC5A5Q92911 643 aa23■■□□□ 1.27
PDLIM4-206ENST00000474421 NECAB3Q96P71 396 aaPredicted RBP23■■□□□ 1.27
PDLIM4-206ENST00000474421 TEKT3Q9BXF9 490 aa23■■□□□ 1.27
PDLIM4-206ENST00000474421 NSUN3Q9H649 340 aaKnown RBP23■■□□□ 1.27
PDLIM4-206ENST00000474421 ERVK-5Q9HDB9 667 aa23■■□□□ 1.27
PDLIM4-206ENST00000474421 LRFN2Q9ULH4 789 aa23■■□□□ 1.27
PDLIM4-206ENST00000474421 CYP3A7-CYP3A51PA0A087WV96 503 aa22.99■■□□□ 1.27
PDLIM4-206ENST00000474421 CYP3A7P24462 503 aa22.99■■□□□ 1.27
PDLIM4-206ENST00000474421 TMOD1P28289 359 aa22.99■■□□□ 1.27
PDLIM4-206ENST00000474421 CRYBB1P53674 252 aaPredicted RBP22.99■■□□□ 1.27
PDLIM4-206ENST00000474421 TMEM266Q2M3C6 531 aa22.99■■□□□ 1.27
PDLIM4-206ENST00000474421 LEXMQ3ZCV2 418 aa22.99■■□□□ 1.27
PDLIM4-206ENST00000474421 RDM1Q8NG50 284 aa22.99■■□□□ 1.27
PDLIM4-206ENST00000474421 LARP6Q9BRS8 491 aaKnown RBP22.99■■□□□ 1.27
PDLIM4-206ENST00000474421 TMX1Q9H3N1 280 aa22.99■■□□□ 1.27
PDLIM4-206ENST00000474421 C1orf112Q9NSG2 853 aa22.99■■□□□ 1.27
PDLIM4-206ENST00000474421 DENND3A2RUS2 1198 aa22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 NCK2O43639 380 aa22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 EDIL3O43854 480 aa22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 OATP04181 439 aa22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 LINC00271P0C7V0 271 aa22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 XBP1P17861 261 aa22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 SARSP49591 514 aaKnown RBP22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 ANAPC15P60006 121 aa22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 NAALADL2Q58DX5 795 aa22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 MOXD1Q6UVY6 613 aa22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 TRMT1LQ7Z2T5 733 aaKnown RBP22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 MAP7D2Q96T17 732 aa22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 SLKQ9H2G2 1235 aaPredicted RBP22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 NOC2LQ9Y3T9 749 aaKnown RBP22.98■■□□□ 1.27
PDLIM4-206ENST00000474421 MYO7AQ13402 2215 aa22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 M0R2N6 131 aa22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 EIF5BO60841 1220 aaKnown RBP22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 KCNA5P22460 613 aa22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 NONOQ15233 471 aaKnown RBP eCLIP22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 KIZQ2M2Z5 673 aa22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 PUS10Q3MIT2 529 aaKnown RBP22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 TCEAL5Q5H9L2 206 aa22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 KRT25Q7Z3Z0 450 aa22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 P2RX5Q93086 422 aa22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 CDHR5Q9HBB8 845 aa22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 ST3GAL5Q9UNP4 418 aa22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 PCDHB7Q9Y5E2 793 aa22.97■■□□□ 1.27
PDLIM4-206ENST00000474421 CHMP2AO43633 222 aa22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 PRKCEQ02156 737 aa22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 ANKRD1Q15327 319 aa22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 EFCAB12Q6NXP0 572 aa22.96■■□□□ 1.27
PDLIM4-206ENST00000474421 SLC24A5Q71RS6 500 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms