RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 REXO1Q8N1G1 1221 aaKnown RBP5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 IL22RA1Q8N6P7 574 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 ZBTB8BQ8NAP8 495 aaPredicted RBP5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 ZNF473Q8WTR7 871 aaKnown RBP5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 ANAPC16Q96DE5 110 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 ZSCAN31Q96LW9 406 aaPredicted RBP5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 HAUS2Q9NVX0 235 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 GALNT8Q9NY28 637 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 TBC1D7Q9P0N9 293 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 TMED5Q9Y3A6 229 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 BZW2Q9Y6E2 419 aaKnown RBP5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 TMEM2Q9UHN6 1383 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 MYOM1P52179 1685 aa5.65□□□□□ -1.5
TMEM39A-206ENST00000473684 NUP188Q5SRE5 1749 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 MYO1BO43795 1136 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 STX10O60499 249 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 PFKFB2O60825 505 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 FAM107AO95990 144 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 GSTP1P09211 210 aaKnown RBP5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 EPXP11678 715 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 XBP1P17861 261 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 CCNG1P51959 295 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 NLRP5P59047 1200 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 EXOSC9Q06265 439 aaKnown RBP5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 BTG3Q14201 252 aaPredicted RBP5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 ANKRD20A8PQ5CZ79 823 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 CMPK2Q5EBM0 449 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 SPECC1Q5M775 1068 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 SH2D4BQ5SQS7 431 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 MSL1Q68DK7 614 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 ZNF746Q6NUN9 644 aaPredicted RBP5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 KANK3Q6NY19 840 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 OLFML1Q6UWY5 402 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 THEMISQ8N1K5 641 aaPredicted RBP5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 AOPEPQ8N6M6 819 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 PPP2R3CQ969Q6 453 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 TRAPPC9Q96Q05 1148 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 COL25A1Q9BXS0 654 aaPredicted RBP5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 OSBPL1AQ9BXW6 950 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 JPH1Q9HDC5 661 aaPredicted RBP5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 DMAP1Q9NPF5 467 aaPredicted RBP5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 IFNKQ9P0W0 207 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 DDX25Q9UHL0 483 aaKnown RBP5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 GDF2Q9UK05 429 aaPredicted RBP5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 TMA7Q9Y2S6 64 aaKnown RBP5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 C2CD2Q9Y426 696 aa5.65□□□□□ -1.51
TMEM39A-206ENST00000473684 SLC27A2O14975 620 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 RHOXF2BP0C7M4 288 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 GIPRP48546 466 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 ELF3P78545 371 aaPredicted RBP5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 RAB33AQ14088 237 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 NFE2L2Q16236 605 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 USH1GQ495M9 461 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 DYDC1Q8WWB3 177 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 RHOXF2Q9BQY4 288 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 NRSN2Q9GZP1 204 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 PCMTD2Q9NV79 361 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 SIRPGQ9P1W8 387 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 PUF60Q9UHX1 559 aaKnown RBP5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 PALD1Q9ULE6 856 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 TBX22Q9Y458 520 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 PPME1Q9Y570 386 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 JCADQ9P266 1359 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 UBN2Q6ZU65 1347 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 AGPSO00116 658 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 GJB2P29033 226 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 LSP1P33241 339 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 PDE6BP35913 854 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 AFF1P51825 1210 aaKnown RBP5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 RPL6Q02878 288 aaKnown RBP5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 KRT72Q14CN4 511 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 MAP1SQ66K74 1059 aaPredicted RBP5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 WDR66Q8TBY9 1149 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 WHAMMQ8TF30 809 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 RUBCNQ92622 972 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 WNT8BQ93098 351 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 GLI3P10071 1580 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 PEAK1Q9H792 1746 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 A0A1B0GVG6 124 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 CFAP73A6NFT4 308 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 PRC1O43663 620 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 BPNT1O95861 308 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 ALBP02768 609 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 BCRP11274 1271 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 HOXA10P31260 410 aaPredicted RBP5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 EIF6P56537 245 aaKnown RBP5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 GSTM4Q03013 218 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 CLCQ05315 142 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 TMEM62Q0P6H9 643 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 CBX3Q13185 183 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 SEPT2Q15019 361 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 PTGISQ16647 500 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 ME3Q16798 604 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 KDM7AQ6ZMT4 941 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 C1orf229Q6ZS94 237 aaPredicted RBP5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 CDC37L1Q7L3B6 337 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 LMNTD2Q8IXW0 634 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 FAM169BQ8N8A8 192 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 SMC1BQ8NDV3 1235 aa5.64□□□□□ -1.51
TMEM39A-206ENST00000473684 RPGRIP1Q96KN7 1286 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms