RNA–Protein interactions for RNA: ENST00000473308.1

C1orf56-203, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-203ENST00000473308 NKX2-4Q9H2Z4 354 aa10.31□□□□□ -0.76
C1orf56-203ENST00000473308 FOXP1Q9H334 677 aaPredicted RBP10.31□□□□□ -0.76
C1orf56-203ENST00000473308 ZNF576Q9H609 170 aa10.31□□□□□ -0.76
C1orf56-203ENST00000473308 NRBP2Q9NSY0 501 aa10.31□□□□□ -0.76
C1orf56-203ENST00000473308 PCDHA11Q9Y5I1 949 aa10.31□□□□□ -0.76
C1orf56-203ENST00000473308 EYSQ5T1H1 3165 aa10.31□□□□□ -0.76
C1orf56-203ENST00000473308 A0A0C4DFX4 3053 aa10.31□□□□□ -0.76
C1orf56-203ENST00000473308 MICAL3Q7RTP6 2002 aa10.31□□□□□ -0.76
C1orf56-203ENST00000473308 KIF28PB7ZC32 967 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 MARCH6O60337 910 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 BAG4O95429 457 aaKnown RBP10.3□□□□□ -0.76
C1orf56-203ENST00000473308 GHRP10912 638 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 SPIRE1Q08AE8 756 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 TMEM62Q0P6H9 643 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 GRIN2CQ14957 1233 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 TARBP2Q15633 366 aaKnown RBP10.3□□□□□ -0.76
C1orf56-203ENST00000473308 CALCRLQ16602 461 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 IER5Q5VY09 327 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.3□□□□□ -0.76
C1orf56-203ENST00000473308 TMCO2Q7Z6W1 182 aaPredicted RBP10.3□□□□□ -0.76
C1orf56-203ENST00000473308 SLFN12Q8IYM2 578 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 LINC01465Q8N7H1 131 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 BANK1Q8NDB2 785 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 APBB2Q92870 758 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 MTMR9Q96QG7 549 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 CEP89Q96ST8 783 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 CDX2Q99626 313 aaPredicted RBP10.3□□□□□ -0.76
C1orf56-203ENST00000473308 NIFKQ9BYG3 293 aaKnown RBP10.3□□□□□ -0.76
C1orf56-203ENST00000473308 IFIH1Q9BYX4 1025 aaKnown RBP10.3□□□□□ -0.76
C1orf56-203ENST00000473308 CELF4Q9BZC1 486 aaKnown RBP10.3□□□□□ -0.76
C1orf56-203ENST00000473308 CEP131Q9UPN4 1083 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 TRPV2Q9Y5S1 764 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 LOXHD1Q8IVV2 1947 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 KDM3AQ9Y4C1 1321 aa10.3□□□□□ -0.76
C1orf56-203ENST00000473308 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.29□□□□□ -0.76
C1orf56-203ENST00000473308 TMEM150BA6NC51 233 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 M0QZ92 97 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 MAGEB2O15479 319 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 NEMFO60524 1076 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 ATP2B1P20020 1258 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 U2AF2P26368 475 aaKnown RBP eCLIP10.29□□□□□ -0.76
C1orf56-203ENST00000473308 GJB2P29033 226 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 PSMC5P62195 406 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 EPHA7Q15375 998 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 XKR3Q5GH77 459 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 TSHZ1Q6ZSZ6 1077 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 NOSTRINQ8IVI9 506 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 METTL13Q8N6R0 699 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 TMEM60Q9H2L4 133 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 AGO3Q9H9G7 860 aaKnown RBP10.29□□□□□ -0.76
C1orf56-203ENST00000473308 CDHR5Q9HBB8 845 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 STXBP5LQ9Y2K9 1186 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 SQORQ9Y6N5 450 aa10.29□□□□□ -0.76
C1orf56-203ENST00000473308 DDX11L8A8MPP1 907 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 GPR32O75388 356 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 ARHGEF15O94989 841 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 GJB5O95377 273 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 AMHP03971 560 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 VTNP04004 478 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 P4HBP07237 508 aaKnown RBP10.28□□□□□ -0.76
C1orf56-203ENST00000473308 CA3P07451 260 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 CD52P31358 61 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 MCM7P33993 719 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 QARSP47897 775 aaKnown RBP10.28□□□□□ -0.76
C1orf56-203ENST00000473308 CLCN3P51790 818 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 GNL2Q13823 731 aaKnown RBP10.28□□□□□ -0.76
C1orf56-203ENST00000473308 ZNF174Q15697 407 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 NCAPH2Q6IBW4 605 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 EFCAB12Q6NXP0 572 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 ANO5Q75V66 913 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 MYOCDQ8IZQ8 938 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 LRRC71Q8N4P6 559 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 MYLIPQ8WY64 445 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 DYDC2Q96IM9 177 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 SH2D3AQ9BRG2 576 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 TTC12Q9H892 705 aaPredicted RBP10.28□□□□□ -0.76
C1orf56-203ENST00000473308 SLC28A3Q9HAS3 691 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 RGL1Q9NZL6 768 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 WRAP73Q9P2S5 460 aaPredicted RBP10.28□□□□□ -0.76
C1orf56-203ENST00000473308 SEPT9Q9UHD8 586 aaPredicted RBP10.28□□□□□ -0.76
C1orf56-203ENST00000473308 PCDHA12Q9UN75 941 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 KIF3AQ9Y496 699 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 TTC3P53804 2025 aa10.28□□□□□ -0.76
C1orf56-203ENST00000473308 IGKV6-21A0A0C4DH24 114 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 LCHNA4D1U4 455 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 ENPP3O14638 875 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 TLL1O43897 1013 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 SLITRK3O94933 977 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 TMOD1P28289 359 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 TXKP42681 527 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 TRAPPC10P48553 1259 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 TOB1P50616 345 aaPredicted RBP10.27□□□□□ -0.77
C1orf56-203ENST00000473308 TBC1D8BQ0IIM8 1120 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 ORC2Q13416 577 aaPredicted RBP10.27□□□□□ -0.77
C1orf56-203ENST00000473308 CUL4AQ13619 759 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 CTTNQ14247 550 aaKnown RBP10.27□□□□□ -0.77
C1orf56-203ENST00000473308 KIZQ2M2Z5 673 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 MTERF2Q49AM1 385 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 TTC38Q5R3I4 469 aa10.27□□□□□ -0.77
C1orf56-203ENST00000473308 PPP2R2DQ66LE6 453 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms