RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 MTA3Q9BTC8 594 aa12.78□□□□□ -0.36
ACTB-209ENST00000473257 LRFN2Q9ULH4 789 aa12.78□□□□□ -0.36
ACTB-209ENST00000473257 RWDD3Q9Y3V2 267 aa12.78□□□□□ -0.36
ACTB-209ENST00000473257 NFASCO94856 1347 aa12.78□□□□□ -0.36
ACTB-209ENST00000473257 EVPLQ92817 2033 aa12.78□□□□□ -0.36
ACTB-209ENST00000473257 KLF18A0A0U1RQI7 1052 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 SMIM35A0A1B0GVV1 85 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 GOLGA8AA7E2F4 631 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 GOLGA8BA8MQT2 603 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 DHX15O43143 795 aaKnown RBP12.77□□□□□ -0.37
ACTB-209ENST00000473257 ZBTB43O43298 467 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 VTNP04004 478 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 ADD1P35611 737 aaKnown RBP12.77□□□□□ -0.37
ACTB-209ENST00000473257 ZNF76P36508 570 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 SREBF1P36956 1147 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 PBX3P40426 434 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 SPOUT1Q5T280 376 aaKnown RBP12.77□□□□□ -0.37
ACTB-209ENST00000473257 ABHD15Q6UXT9 468 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 SYNE3Q6ZMZ3 975 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 PLA2G4DQ86XP0 818 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 RASGRP4Q8TDF6 673 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 NEK1Q96PY6 1258 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 PHOX2BQ99453 314 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 OSMRQ99650 979 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 APOL5Q9BWW9 433 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 PLVAPQ9BX97 442 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 PRKAG3Q9UGI9 489 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 CDH22Q9UJ99 828 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 ST3GAL5Q9UNP4 418 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 FAM50BQ9Y247 325 aa12.77□□□□□ -0.37
ACTB-209ENST00000473257 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
ACTB-209ENST00000473257 WDR87Q6ZQQ6 2873 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 IGKV6D-21A0A0A0MT36 114 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 MAFGO15525 162 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 RPS6KA5O75582 802 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 ATG7O95352 703 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 CLK2P49760 499 aaKnown RBP12.76□□□□□ -0.37
ACTB-209ENST00000473257 ERVFC1P60507 584 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 NHLH1Q02575 133 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 PDXDC2PQ6P474 469 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 CKAP2LQ8IYA6 745 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 EFHBQ8N7U6 833 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 MICAL1Q8TDZ2 1067 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 ATP8B4Q8TF62 1192 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 GJA10Q969M2 543 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 FTHL17Q9BXU8 183 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 TYW1Q9NV66 732 aaKnown RBP12.76□□□□□ -0.37
ACTB-209ENST00000473257 BARHL2Q9NY43 387 aa12.76□□□□□ -0.37
ACTB-209ENST00000473257 USP15Q9Y4E8 981 aaPredicted RBP12.76□□□□□ -0.37
ACTB-209ENST00000473257 IGLV3-22A0A075B6J6 115 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 DENND3A2RUS2 1198 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 NCK2O43639 380 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 C22orf31O95567 290 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 STAG3L1P0CL83 205 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 SP100P23497 879 aaPredicted RBP12.75□□□□□ -0.37
ACTB-209ENST00000473257 SARSP49591 514 aaKnown RBP12.75□□□□□ -0.37
ACTB-209ENST00000473257 CLCN3P51790 818 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 IER5LQ5T953 404 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 USP34Q70CQ2 3546 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 FAM228AQ86W67 206 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 METTL13Q8N6R0 699 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 P2RX5Q93086 422 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 ZFHX2Q9C0A1 2572 aaPredicted RBP12.75□□□□□ -0.37
ACTB-209ENST00000473257 TLE6Q9H808 572 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 ZNF302Q9NR11 478 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 PCDHB7Q9Y5E2 793 aa12.75□□□□□ -0.37
ACTB-209ENST00000473257 FNDC1Q4ZHG4 1894 aaPredicted RBP12.74□□□□□ -0.37
ACTB-209ENST00000473257 KDM3AQ9Y4C1 1321 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 C9IYK1 514 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 IPO5O00410 1097 aaKnown RBP12.74□□□□□ -0.37
ACTB-209ENST00000473257 HBP1O60381 514 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 FGF18O76093 207 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 FOSP01100 380 aaPredicted RBP12.74□□□□□ -0.37
ACTB-209ENST00000473257 FGFR4P22455 802 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 MRE11P49959 708 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 HERC4Q5GLZ8 1057 aaPredicted RBP12.74□□□□□ -0.37
ACTB-209ENST00000473257 PLPP4Q5VZY2 271 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 FAM160B1Q5W0V3 765 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 PPP1R18Q6NYC8 613 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 LLGL2Q6P1M3 1020 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 LRRC55Q6ZSA7 311 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 DHX32Q7L7V1 743 aaKnown RBP12.74□□□□□ -0.37
ACTB-209ENST00000473257 LRRC71Q8N4P6 559 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 COLGALT1Q8NBJ5 622 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 SMRP1Q8NCR6 262 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 PHKBQ93100 1093 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 RPGRIP1Q96KN7 1286 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 UPF3BQ9BZI7 483 aaKnown RBP12.74□□□□□ -0.37
ACTB-209ENST00000473257 RNF19AQ9NV58 838 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 RBM28Q9NW13 759 aaKnown RBP12.74□□□□□ -0.37
ACTB-209ENST00000473257 SQORQ9Y6N5 450 aa12.74□□□□□ -0.37
ACTB-209ENST00000473257 GPR32O75388 356 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 CSDE1O75534 798 aaKnown RBP12.73□□□□□ -0.37
ACTB-209ENST00000473257 EYA4O95677 639 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 UGCGQ16739 394 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 PRR16Q569H4 304 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 MIS18BP1Q6P0N0 1132 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 THNSL1Q8IYQ7 743 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 NME8Q8N427 588 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 RNF169Q8NCN4 708 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms