RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 REV3LO60673 3130 aa23.46■■□□□ 1.35
EPHB3-202ENST00000473079 PSMD10O75832 226 aa23.46■■□□□ 1.35
EPHB3-202ENST00000473079 C22orf31O95567 290 aa23.46■■□□□ 1.35
EPHB3-202ENST00000473079 XBP1P17861 261 aa23.46■■□□□ 1.35
EPHB3-202ENST00000473079 JAK3P52333 1124 aa23.46■■□□□ 1.35
EPHB3-202ENST00000473079 NONOQ15233 471 aaKnown RBP eCLIP23.46■■□□□ 1.35
EPHB3-202ENST00000473079 EPC2Q52LR7 807 aa23.46■■□□□ 1.35
EPHB3-202ENST00000473079 LRCH2Q5VUJ6 765 aa23.46■■□□□ 1.35
EPHB3-202ENST00000473079 RTN4RL1Q86UN2 441 aaPredicted RBP23.46■■□□□ 1.35
EPHB3-202ENST00000473079 CRIPAKQ8N1N5 446 aa23.46■■□□□ 1.35
EPHB3-202ENST00000473079 FBXO22Q8NEZ5 403 aa23.46■■□□□ 1.35
EPHB3-202ENST00000473079 RDM1Q8NG50 284 aa23.46■■□□□ 1.35
EPHB3-202ENST00000473079 COG5Q9UP83 839 aa23.46■■□□□ 1.35
EPHB3-202ENST00000473079 MAGEB2O15479 319 aa23.45■■□□□ 1.34
EPHB3-202ENST00000473079 PAK2Q13177 524 aa23.45■■□□□ 1.34
EPHB3-202ENST00000473079 B3GNT9Q6UX72 402 aa23.45■■□□□ 1.34
EPHB3-202ENST00000473079 UNC45AQ9H3U1 944 aa23.45■■□□□ 1.34
EPHB3-202ENST00000473079 RC3H2Q9HBD1 1191 aaKnown RBP23.45■■□□□ 1.34
EPHB3-202ENST00000473079 NRBP2Q9NSY0 501 aa23.45■■□□□ 1.34
EPHB3-202ENST00000473079 KCNJ14Q9UNX9 436 aa23.45■■□□□ 1.34
EPHB3-202ENST00000473079 ZNF862O60290 1169 aa23.44■■□□□ 1.34
EPHB3-202ENST00000473079 CTDNEP1O95476 244 aa23.44■■□□□ 1.34
EPHB3-202ENST00000473079 TDP2O95551 362 aa23.44■■□□□ 1.34
EPHB3-202ENST00000473079 AAK1Q2M2I8 961 aa23.44■■□□□ 1.34
EPHB3-202ENST00000473079 TMEM192Q8IY95 271 aa23.44■■□□□ 1.34
EPHB3-202ENST00000473079 ZNF710Q8N1W2 664 aa23.44■■□□□ 1.34
EPHB3-202ENST00000473079 LINC01599Q8WXQ3 324 aa23.44■■□□□ 1.34
EPHB3-202ENST00000473079 WASF1Q92558 559 aa23.44■■□□□ 1.34
EPHB3-202ENST00000473079 ZNF689Q96CS4 500 aaPredicted RBP23.44■■□□□ 1.34
EPHB3-202ENST00000473079 SPTBN5Q9NRC6 3674 aaKnown RBP23.44■■□□□ 1.34
EPHB3-202ENST00000473079 PRRC2BQ5JSZ5 2229 aaKnown RBP23.43■■□□□ 1.34
EPHB3-202ENST00000473079 H3BNC9 293 aa23.43■■□□□ 1.34
EPHB3-202ENST00000473079 DGKIO75912 1065 aa23.43■■□□□ 1.34
EPHB3-202ENST00000473079 SKIV2LQ15477 1246 aaKnown RBP23.43■■□□□ 1.34
EPHB3-202ENST00000473079 ODR4Q5SWX8 454 aa23.43■■□□□ 1.34
EPHB3-202ENST00000473079 FIBCD1Q8N539 461 aa23.43■■□□□ 1.34
EPHB3-202ENST00000473079 ETNPPLQ8TBG4 499 aa23.43■■□□□ 1.34
EPHB3-202ENST00000473079 CDHR5Q9HBB8 845 aa23.43■■□□□ 1.34
EPHB3-202ENST00000473079 COL4A4P53420 1690 aaPredicted RBP23.42■■□□□ 1.34
EPHB3-202ENST00000473079 CCDC194A0A1B0GVG4 234 aa23.42■■□□□ 1.34
EPHB3-202ENST00000473079 OATP04181 439 aa23.42■■□□□ 1.34
EPHB3-202ENST00000473079 CRYBB1P53674 252 aaPredicted RBP23.42■■□□□ 1.34
EPHB3-202ENST00000473079 INF2Q27J81 1249 aa23.42■■□□□ 1.34
EPHB3-202ENST00000473079 PPP4R3AQ6IN85 833 aa23.42■■□□□ 1.34
EPHB3-202ENST00000473079 LINC01465Q8N7H1 131 aa23.42■■□□□ 1.34
EPHB3-202ENST00000473079 ERVK-5Q9HDB9 667 aa23.42■■□□□ 1.34
EPHB3-202ENST00000473079 ORC3Q9UBD5 711 aaPredicted RBP23.42■■□□□ 1.34
EPHB3-202ENST00000473079 DDX25Q9UHL0 483 aaKnown RBP23.42■■□□□ 1.34
EPHB3-202ENST00000473079 NOC2LQ9Y3T9 749 aaKnown RBP23.42■■□□□ 1.34
EPHB3-202ENST00000473079 ADGRA3Q8IWK6 1321 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 C5orf67F2Z3F1 127 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 RPS6KA5O75582 802 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 RB1P06400 928 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 LINC00271P0C7V0 271 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 ME3Q16798 604 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 NPAS4Q8IUM7 802 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 METTL13Q8N6R0 699 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 CLP1Q92989 425 aaKnown RBP23.41■■□□□ 1.34
EPHB3-202ENST00000473079 HLA-CQ95604 372 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 GTF3C6Q969F1 213 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 GJA10Q969M2 543 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 MRPL38Q96DV4 380 aaKnown RBP23.41■■□□□ 1.34
EPHB3-202ENST00000473079 TMX1Q9H3N1 280 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 RWDD3Q9Y3V2 267 aa23.41■■□□□ 1.34
EPHB3-202ENST00000473079 GPR182O15218 404 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 CHMP2AO43633 222 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 GPR32O75388 356 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 STAG3L1P0CL83 205 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 BMP1P13497 986 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 FDPSP14324 419 aaKnown RBP23.4■■□□□ 1.34
EPHB3-202ENST00000473079 GCFC2P16383 781 aaKnown RBP23.4■■□□□ 1.34
EPHB3-202ENST00000473079 TMOD1P28289 359 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 NEK4P51957 841 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 PRKCEQ02156 737 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 GPM6BQ13491 265 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 UGCGQ16739 394 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 PTPROQ16827 1216 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 TRMT1LQ7Z2T5 733 aaKnown RBP23.4■■□□□ 1.34
EPHB3-202ENST00000473079 MIER3Q7Z3K6 550 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 NEK8Q86SG6 692 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 TMEM40Q8WWA1 233 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 FAM20AQ96MK3 541 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 NAP1L4Q99733 375 aaKnown RBP23.4■■□□□ 1.34
EPHB3-202ENST00000473079 NIFKQ9BYG3 293 aaKnown RBP23.4■■□□□ 1.34
EPHB3-202ENST00000473079 GJB4Q9NTQ9 266 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 GINS2Q9Y248 185 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 TTC3P53804 2025 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 XIRP2A4UGR9 3374 aa23.4■■□□□ 1.34
EPHB3-202ENST00000473079 SEC24BO95487 1268 aa23.39■■□□□ 1.33
EPHB3-202ENST00000473079 BMPR1AP36894 532 aa23.39■■□□□ 1.33
EPHB3-202ENST00000473079 TFF2Q03403 129 aa23.39■■□□□ 1.33
EPHB3-202ENST00000473079 NFX1Q12986 1120 aaKnown RBP23.39■■□□□ 1.33
EPHB3-202ENST00000473079 TARBP2Q15633 366 aaKnown RBP23.39■■□□□ 1.33
EPHB3-202ENST00000473079 TMEM266Q2M3C6 531 aa23.39■■□□□ 1.33
EPHB3-202ENST00000473079 LETM2Q2VYF4 491 aa23.39■■□□□ 1.33
EPHB3-202ENST00000473079 XKR3Q5GH77 459 aa23.39■■□□□ 1.33
EPHB3-202ENST00000473079 EFCAB12Q6NXP0 572 aa23.39■■□□□ 1.33
EPHB3-202ENST00000473079 NECAB1Q8N987 351 aa23.39■■□□□ 1.33
EPHB3-202ENST00000473079 KCNMB3Q9NPA1 279 aa23.39■■□□□ 1.33
EPHB3-202ENST00000473079 RNF216Q9NWF9 866 aaPredicted RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms