RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CLP1Q92989 425 aaKnown RBP17.33■□□□□ 0.36
VTI1A-203ENST00000472892 ADGRA3Q8IWK6 1321 aa17.32■□□□□ 0.36
VTI1A-203ENST00000472892 NLRP5P59047 1200 aa17.32■□□□□ 0.36
VTI1A-203ENST00000472892 CKAP2LQ8IYA6 745 aa17.32■□□□□ 0.36
VTI1A-203ENST00000472892 LARP6Q9BRS8 491 aaKnown RBP17.32■□□□□ 0.36
VTI1A-203ENST00000472892 UPF3BQ9BZI7 483 aaKnown RBP17.32■□□□□ 0.36
VTI1A-203ENST00000472892 TMX1Q9H3N1 280 aa17.32■□□□□ 0.36
VTI1A-203ENST00000472892 PCDHA4Q9UN74 947 aa17.32■□□□□ 0.36
VTI1A-203ENST00000472892 RWDD3Q9Y3V2 267 aa17.32■□□□□ 0.36
VTI1A-203ENST00000472892 TTC3P53804 2025 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 CPLX1O14810 134 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 MSH4O15457 936 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 DEXIO95424 95 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 C22orf31O95567 290 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 NEFLP07196 543 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 BTG3Q14201 252 aaPredicted RBP17.31■□□□□ 0.36
VTI1A-203ENST00000472892 NPAS4Q8IUM7 802 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 FAM177A1Q8N128 213 aaPredicted RBP17.31■□□□□ 0.36
VTI1A-203ENST00000472892 BANK1Q8NDB2 785 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 RIT2Q99578 217 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 C22orf23Q9BZE7 217 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 UBE2ZQ9H832 354 aaPredicted RBP17.31■□□□□ 0.36
VTI1A-203ENST00000472892 CDHR5Q9HBB8 845 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 PDRG1Q9NUG6 133 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 GABBR1Q9UBS5 961 aa17.31■□□□□ 0.36
VTI1A-203ENST00000472892 TCF20Q9UGU0 1960 aaKnown RBP17.3■□□□□ 0.36
VTI1A-203ENST00000472892 WDR64B1ANS9 1081 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 M0R2N6 131 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 CTNNB1P35222 781 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 TMEM266Q2M3C6 531 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 LEXMQ3ZCV2 418 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 TIGD5Q53EQ6 642 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 GALNT17Q6IS24 598 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 TBCKQ8TEA7 893 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 SLC5A5Q92911 643 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 C11orf84Q9BUA3 381 aaPredicted RBP17.3■□□□□ 0.36
VTI1A-203ENST00000472892 PLVAPQ9BX97 442 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 ERVK-5Q9HDB9 667 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 DISC1Q9NRI5 854 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 TCEAL9Q9UHQ7 104 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 CEP131Q9UPN4 1083 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 NOC2LQ9Y3T9 749 aaKnown RBP17.3■□□□□ 0.36
VTI1A-203ENST00000472892 NCOR1O75376 2440 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 BDP1A6H8Y1 2624 aa17.3■□□□□ 0.36
VTI1A-203ENST00000472892 CYP3A7-CYP3A51PA0A087WV96 503 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 MAGEB2O15479 319 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 RPS6KA5O75582 802 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 STAG3L1P0CL83 205 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 CYP3A7P24462 503 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 CRYBB1P53674 252 aaPredicted RBP17.29■□□□□ 0.36
VTI1A-203ENST00000472892 NFX1Q12986 1120 aaKnown RBP17.29■□□□□ 0.36
VTI1A-203ENST00000472892 COL19A1Q14993 1142 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 NPY5RQ15761 445 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 Q4G0T1 1027 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 CPLX2Q6PUV4 134 aaKnown RBP17.29■□□□□ 0.36
VTI1A-203ENST00000472892 CMTR2Q8IYT2 770 aaKnown RBP17.29■□□□□ 0.36
VTI1A-203ENST00000472892 BLIDQ8IZY5 108 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 DAGLBQ8NCG7 672 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 TMEM40Q8WWA1 233 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 FAM167AQ96KS9 214 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 LMAN2LQ9H0V9 348 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 GINS2Q9Y248 185 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 SAMM50Q9Y512 469 aa17.29■□□□□ 0.36
VTI1A-203ENST00000472892 GRM6O15303 877 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 ZNF862O60290 1169 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 GPR32O75388 356 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 KCNA5P22460 613 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 SFNP31947 248 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 STK3Q13188 491 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 TCEAL5Q5H9L2 206 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 ODR4Q5SWX8 454 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 TRMT1LQ7Z2T5 733 aaKnown RBP17.28■□□□□ 0.36
VTI1A-203ENST00000472892 METTL13Q8N6R0 699 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.28■□□□□ 0.36
VTI1A-203ENST00000472892 NEK9Q8TD19 979 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 MBOAT7Q96N66 472 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 NSUN3Q9H649 340 aaKnown RBP17.28■□□□□ 0.36
VTI1A-203ENST00000472892 RGS18Q9NS28 235 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 NRBP2Q9NSY0 501 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 ST3GAL5Q9UNP4 418 aa17.28■□□□□ 0.36
VTI1A-203ENST00000472892 MRPL42Q9Y6G3 142 aaKnown RBP17.28■□□□□ 0.36
VTI1A-203ENST00000472892 RALGAPA2Q2PPJ7 1873 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 GPR182O15218 404 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 MGEA5O60502 916 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 GAS7O60861 476 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 PSMD10O75832 226 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 SARSP49591 514 aaKnown RBP17.27■□□□□ 0.36
VTI1A-203ENST00000472892 KIZQ2M2Z5 673 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 LRCH2Q5VUJ6 765 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 MOXD1Q6UVY6 613 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 LINC01465Q8N7H1 131 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 P2RX5Q93086 422 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 GJA10Q969M2 543 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 AIFM3Q96NN9 605 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 TEKT3Q9BXF9 490 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 UNC45AQ9H3U1 944 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 C1orf112Q9NSG2 853 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 PPP4R2Q9NY27 417 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 PCDHB7Q9Y5E2 793 aa17.27■□□□□ 0.36
VTI1A-203ENST00000472892 VTNP04004 478 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms