RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 DBR1Q9UK59 544 aaKnown RBP22.34■■□□□ 1.17
SF1-213ENST00000472725 SMIM35A0A1B0GVV1 85 aa22.33■■□□□ 1.17
SF1-213ENST00000472725 PARNO95453 639 aaKnown RBP22.33■■□□□ 1.17
SF1-213ENST00000472725 KLRC1P26715 233 aa22.33■■□□□ 1.17
SF1-213ENST00000472725 UBA7P41226 1012 aa22.33■■□□□ 1.17
SF1-213ENST00000472725 RSPH3Q86UC2 560 aa22.33■■□□□ 1.17
SF1-213ENST00000472725 ZNF710Q8N1W2 664 aa22.33■■□□□ 1.17
SF1-213ENST00000472725 RETREG2Q8NC44 543 aa22.33■■□□□ 1.17
SF1-213ENST00000472725 PPP1R13LQ8WUF5 828 aa22.33■■□□□ 1.17
SF1-213ENST00000472725 NOC4LQ9BVI4 516 aaKnown RBP22.33■■□□□ 1.17
SF1-213ENST00000472725 HIPK3Q9H422 1215 aa22.33■■□□□ 1.17
SF1-213ENST00000472725 CYP26B1Q9NR63 512 aa22.33■■□□□ 1.17
SF1-213ENST00000472725 TCHHQ07283 1943 aa22.32■■□□□ 1.16
SF1-213ENST00000472725 CUTAO60888 179 aa22.32■■□□□ 1.16
SF1-213ENST00000472725 TIMP1P01033 207 aa22.32■■□□□ 1.16
SF1-213ENST00000472725 RFC5P40937 340 aa22.32■■□□□ 1.16
SF1-213ENST00000472725 IGBP1P78318 339 aa22.32■■□□□ 1.16
SF1-213ENST00000472725 ZNF200P98182 395 aaPredicted RBP22.32■■□□□ 1.16
SF1-213ENST00000472725 TBC1D8BQ0IIM8 1120 aa22.32■■□□□ 1.16
SF1-213ENST00000472725 FOXD4L6Q3SYB3 417 aaPredicted RBP22.32■■□□□ 1.16
SF1-213ENST00000472725 FOXD4L3Q6VB84 417 aaPredicted RBP22.32■■□□□ 1.16
SF1-213ENST00000472725 NME8Q8N427 588 aa22.32■■□□□ 1.16
SF1-213ENST00000472725 MMTAG2Q9BU76 263 aaKnown RBP22.32■■□□□ 1.16
SF1-213ENST00000472725 PRDM5Q9NQX1 630 aaPredicted RBP22.32■■□□□ 1.16
SF1-213ENST00000472725 MKI67P46013 3256 aaKnown RBP22.32■■□□□ 1.16
SF1-213ENST00000472725 GAS2O43903 313 aaKnown RBP22.31■■□□□ 1.16
SF1-213ENST00000472725 C22orf31O95567 290 aa22.31■■□□□ 1.16
SF1-213ENST00000472725 CYP2C9P11712 490 aa22.31■■□□□ 1.16
SF1-213ENST00000472725 RAG1P15918 1043 aa22.31■■□□□ 1.16
SF1-213ENST00000472725 TMOD1P28289 359 aa22.31■■□□□ 1.16
SF1-213ENST00000472725 TXLNAP40222 546 aa22.31■■□□□ 1.16
SF1-213ENST00000472725 CABP7Q86V35 215 aa22.31■■□□□ 1.16
SF1-213ENST00000472725 CALML4Q96GE6 196 aa22.31■■□□□ 1.16
SF1-213ENST00000472725 CEP170P1Q96L14 293 aa22.31■■□□□ 1.16
SF1-213ENST00000472725 CEP89Q96ST8 783 aa22.31■■□□□ 1.16
SF1-213ENST00000472725 CSRNP2Q9H175 543 aa22.31■■□□□ 1.16
SF1-213ENST00000472725 ARID2Q68CP9 1835 aa22.31■■□□□ 1.16
SF1-213ENST00000472725 TRIM43BA6NCK2 446 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 PP2D1A8MPX8 630 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 TRIM71Q2Q1W2 868 aaKnown RBP22.3■■□□□ 1.16
SF1-213ENST00000472725 MTERF2Q49AM1 385 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 TRMT1LQ7Z2T5 733 aaKnown RBP22.3■■□□□ 1.16
SF1-213ENST00000472725 SH3RF1Q7Z6J0 888 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 TRAPPC12Q8WVT3 735 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 SLC7A3Q8WY07 619 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 DHX38Q92620 1227 aaKnown RBP22.3■■□□□ 1.16
SF1-213ENST00000472725 TRIM43Q96BQ3 446 aaPredicted RBP22.3■■□□□ 1.16
SF1-213ENST00000472725 CDK5RAP3Q96JB5 506 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 SPATA32Q96LK8 384 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 CCDC43Q96MW1 224 aaKnown RBP22.3■■□□□ 1.16
SF1-213ENST00000472725 KIAA1024Q9UPX6 916 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 DNM3Q9UQ16 869 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 DNAH12Q6ZR08 3092 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 EVPLQ92817 2033 aa22.3■■□□□ 1.16
SF1-213ENST00000472725 IGKV6-21A0A0C4DH24 114 aa22.29■■□□□ 1.16
SF1-213ENST00000472725 MAFO75444 373 aaPredicted RBP22.29■■□□□ 1.16
SF1-213ENST00000472725 NCLP19338 710 aaKnown RBP22.29■■□□□ 1.16
SF1-213ENST00000472725 CDC25AP30304 524 aa22.29■■□□□ 1.16
SF1-213ENST00000472725 RARRES1P49788 294 aa22.29■■□□□ 1.16
SF1-213ENST00000472725 CDC42EP1Q00587 391 aa22.29■■□□□ 1.16
SF1-213ENST00000472725 GRIN1Q05586 938 aa22.29■■□□□ 1.16
SF1-213ENST00000472725 XKR9Q5GH70 373 aa22.29■■□□□ 1.16
SF1-213ENST00000472725 POTEGQ6S5H5 508 aa22.29■■□□□ 1.16
SF1-213ENST00000472725 LEO1Q8WVC0 666 aaPredicted RBP22.29■■□□□ 1.16
SF1-213ENST00000472725 DHX33Q9H6R0 707 aaKnown RBP22.29■■□□□ 1.16
SF1-213ENST00000472725 DDX19AQ9NUU7 478 aaKnown RBP22.29■■□□□ 1.16
SF1-213ENST00000472725 CCDC39Q9UFE4 941 aa22.29■■□□□ 1.16
SF1-213ENST00000472725 DGAT1O75907 488 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 CKBP12277 381 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 SELPP16109 830 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 RFC2P35250 354 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 ME1P48163 572 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 DNM2P50570 870 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 FAM26DQ5JW98 314 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 PLA2G4FQ68DD2 849 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 MFSD5Q6N075 450 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 TMEM199Q8N511 208 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 LINC01465Q8N7H1 131 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 PIGOQ8TEQ8 1089 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 CLIC6Q96NY7 704 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 LTBP2Q14767 1821 aa22.28■■□□□ 1.16
SF1-213ENST00000472725 EYA4O95677 639 aa22.27■■□□□ 1.16
SF1-213ENST00000472725 POLGP54098 1239 aaPredicted RBP22.27■■□□□ 1.16
SF1-213ENST00000472725 NPEPPSP55786 919 aa22.27■■□□□ 1.16
SF1-213ENST00000472725 GRB10Q13322 594 aa22.27■■□□□ 1.16
SF1-213ENST00000472725 ECM1Q16610 540 aa22.27■■□□□ 1.16
SF1-213ENST00000472725 TMEM119Q4V9L6 283 aa22.27■■□□□ 1.16
SF1-213ENST00000472725 IER5Q5VY09 327 aa22.27■■□□□ 1.16
SF1-213ENST00000472725 EFCAB12Q6NXP0 572 aa22.27■■□□□ 1.16
SF1-213ENST00000472725 FAM43BQ6ZT52 329 aaPredicted RBP22.27■■□□□ 1.16
SF1-213ENST00000472725 SYMPKQ92797 1274 aaKnown RBP22.27■■□□□ 1.16
SF1-213ENST00000472725 MAP7D2Q96T17 732 aa22.27■■□□□ 1.16
SF1-213ENST00000472725 LBHD1Q9BQE6 289 aaPredicted RBP22.27■■□□□ 1.16
SF1-213ENST00000472725 TANC1Q9C0D5 1861 aa22.27■■□□□ 1.16
SF1-213ENST00000472725 PCDHA7Q9UN72 937 aa22.27■■□□□ 1.16
SF1-213ENST00000472725 TMEM150BA6NC51 233 aa22.26■■□□□ 1.15
SF1-213ENST00000472725 ZBTB39O15060 712 aa22.26■■□□□ 1.15
SF1-213ENST00000472725 IQCF3P0C7M6 154 aa22.26■■□□□ 1.15
SF1-213ENST00000472725 THPOP40225 353 aa22.26■■□□□ 1.15
SF1-213ENST00000472725 AXDND1Q5T1B0 1012 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms