RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 TMEM192Q8IY95 271 aa17.79■□□□□ 0.44
CCDC88B-205ENST00000472524 SMAP1Q8IYB5 467 aaPredicted RBP17.79■□□□□ 0.44
CCDC88B-205ENST00000472524 SAMD11Q96NU1 681 aa17.79■□□□□ 0.44
CCDC88B-205ENST00000472524 AGO3Q9H9G7 860 aaKnown RBP17.79■□□□□ 0.44
CCDC88B-205ENST00000472524 C11orf16Q9NQ32 467 aa17.79■□□□□ 0.44
CCDC88B-205ENST00000472524 GABBR1Q9UBS5 961 aa17.79■□□□□ 0.44
CCDC88B-205ENST00000472524 COL4A6Q14031 1691 aa17.79■□□□□ 0.44
CCDC88B-205ENST00000472524 MSH4O15457 936 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 CHMP2AO43633 222 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 CDKL5O76039 1030 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 IL9P15248 144 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 USP11P51784 963 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 GPM6BQ13491 265 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 ZNF484Q5JVG2 852 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 TMEM31Q5JXX7 168 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 BANK1Q8NDB2 785 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 GJA10Q969M2 543 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 FAM122AQ96E09 287 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 CELF4Q9BZC1 486 aaKnown RBP17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 C22orf23Q9BZE7 217 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 TPCN1Q9ULQ1 816 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 KCNJ14Q9UNX9 436 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 GINS2Q9Y248 185 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 PCDHA10Q9Y5I2 948 aa17.78■□□□□ 0.44
CCDC88B-205ENST00000472524 WDR64B1ANS9 1081 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 ZBTB42B2RXF5 422 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 H3BQ06 376 aaPredicted RBP17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 ENPP3O14638 875 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 GAS7O60861 476 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 TDP2O95551 362 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 CENPBP07199 599 aaPredicted RBP17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 ANAPC15P60006 121 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 PAK2Q13177 524 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 TCEAL5Q5H9L2 206 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 LRCH2Q5VUJ6 765 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 PTCRAQ6ISU1 281 aaPredicted RBP17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 FAM178BQ8IXR5 827 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 DAGLBQ8NCG7 672 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 LINC01599Q8WXQ3 324 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 BBXQ8WY36 941 aaPredicted RBP17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 IL17RAQ96F46 866 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 PPP1R16BQ96T49 567 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 TEKT3Q9BXF9 490 aa17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 MAFBQ9Y5Q3 323 aaPredicted RBP17.77■□□□□ 0.44
CCDC88B-205ENST00000472524 IGSF9BQ9UPX0 1349 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 M0R2N6 131 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 PFKFB2O60825 505 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 AK2P54819 239 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 NPY5RQ15761 445 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 TMEM266Q2M3C6 531 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 TIGD5Q53EQ6 642 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 NME8Q8N427 588 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 NEK9Q8TD19 979 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 SLC5A5Q92911 643 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 UNC45AQ9H3U1 944 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 DISC1Q9NRI5 854 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 PADI3Q9ULW8 664 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 SQORQ9Y6N5 450 aa17.76■□□□□ 0.43
CCDC88B-205ENST00000472524 FNDC1Q4ZHG4 1894 aaPredicted RBP17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 STK36Q9NRP7 1315 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 KDM3AQ9Y4C1 1321 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 GRXCR2A6NFK2 248 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 PI4K2BG5E9Z4 385 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 LINC00271P0C7V0 271 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 IBSPP21815 317 aaPredicted RBP17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 NONOQ15233 471 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 ANKRD1Q15327 319 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 INF2Q27J81 1249 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 GALNT17Q6IS24 598 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 KIAA0319LQ8IZA0 1049 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 GJD3Q8N144 294 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 FIBCD1Q8N539 461 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 METTL13Q8N6R0 699 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 RIT2Q99578 217 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 FTHL17Q9BXU8 183 aa17.75■□□□□ 0.43
CCDC88B-205ENST00000472524 ADGRA3Q8IWK6 1321 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 GPR37L1O60883 481 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 C22orf31O95567 290 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 CTNNB1P35222 781 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 JAK3P52333 1124 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 NFX1Q12986 1120 aaKnown RBP17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 UGCGQ16739 394 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 Q4G0T1 1027 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 EP400NLQ6ZTU2 488 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 KRT25Q7Z3Z0 450 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 FAM177A1Q8N128 213 aaPredicted RBP17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 FAM167AQ96KS9 214 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 NSUN3Q9H649 340 aaKnown RBP17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 CDHR5Q9HBB8 845 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 GJB4Q9NTQ9 266 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 CEP131Q9UPN4 1083 aa17.74■□□□□ 0.43
CCDC88B-205ENST00000472524 CYP3A7-CYP3A51PA0A087WV96 503 aa17.73■□□□□ 0.43
CCDC88B-205ENST00000472524 CCDC194A0A1B0GVG4 234 aa17.73■□□□□ 0.43
CCDC88B-205ENST00000472524 GRM6O15303 877 aa17.73■□□□□ 0.43
CCDC88B-205ENST00000472524 ZNF862O60290 1169 aa17.73■□□□□ 0.43
CCDC88B-205ENST00000472524 RPS6KA5O75582 802 aa17.73■□□□□ 0.43
CCDC88B-205ENST00000472524 CTDNEP1O95476 244 aa17.73■□□□□ 0.43
CCDC88B-205ENST00000472524 VTNP04004 478 aa17.73■□□□□ 0.43
CCDC88B-205ENST00000472524 OATP04181 439 aa17.73■□□□□ 0.43
CCDC88B-205ENST00000472524 XBP1P17861 261 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms