RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 E9PMD0 336 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 ZNF202O95125 648 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 KRT18P05783 430 aaKnown RBP18.78■□□□□ 0.6
CCM2-205ENST00000472223 PLA2G4BP0C869 781 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 PTPN11Q06124 597 aaPredicted RBP18.78■□□□□ 0.6
CCM2-205ENST00000472223 ITGA7Q13683 1181 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 DHX8Q14562 1220 aaKnown RBP18.78■□□□□ 0.6
CCM2-205ENST00000472223 ECM1Q16610 540 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 NBPF20Q3BBV1 942 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 COL13A1Q5TAT6 717 aaPredicted RBP18.78■□□□□ 0.6
CCM2-205ENST00000472223 NFRKBQ6P4R8 1299 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 RETREG2Q8NC44 543 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 SLC7A3Q8WY07 619 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 KAT2BQ92831 832 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 SENP6Q9GZR1 1112 aaPredicted RBP18.78■□□□□ 0.6
CCM2-205ENST00000472223 BHMT2Q9H2M3 363 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 CYP26B1Q9NR63 512 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 WRAP73Q9P2S5 460 aaPredicted RBP18.78■□□□□ 0.6
CCM2-205ENST00000472223 CENPFP49454 3210 aa18.78■□□□□ 0.6
CCM2-205ENST00000472223 C17orf102A2RUQ5 167 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 HAS3O00219 553 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 MAGEB2O15479 319 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 SLFN14P0C7P3 912 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 SMIM10L2AP0DMW4 78 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 SMIM10L2BP0DMW5 78 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 INSRRP14616 1297 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 ATP4AP20648 1035 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 RFC5P40937 340 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 DNM2P50570 870 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 POLGP54098 1239 aaPredicted RBP18.77■□□□□ 0.6
CCM2-205ENST00000472223 PSMC6P62333 389 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 IGBP1P78318 339 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 TBC1D8BQ0IIM8 1120 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 ANO5Q75V66 913 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 NECAB2Q7Z6G3 386 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 KCND2Q9NZV8 630 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 NOD1Q9Y239 953 aa18.77■□□□□ 0.6
CCM2-205ENST00000472223 A0A087WWV3 80 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 DGAT1O75907 488 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 TMOD1P28289 359 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 RARRES1P49788 294 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 GRIK4Q16099 956 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 PLA2G4FQ68DD2 849 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 TNS4Q8IZW8 715 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 SYT2Q8N9I0 419 aaPredicted RBP18.76■□□□□ 0.59
CCM2-205ENST00000472223 TIGD1Q96MW7 591 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 TNMDQ9H2S6 317 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 GOLPH3LQ9H4A5 285 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 C11orf49Q9H6J7 331 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 SERTAD1Q9UHV2 236 aa18.76■□□□□ 0.59
CCM2-205ENST00000472223 MROH7Q68CQ1 1323 aa18.75■□□□□ 0.59
CCM2-205ENST00000472223 GAS2O43903 313 aaKnown RBP18.75■□□□□ 0.59
CCM2-205ENST00000472223 NPEPPSP55786 919 aa18.75■□□□□ 0.59
CCM2-205ENST00000472223 MCM6Q14566 821 aa18.75■□□□□ 0.59
CCM2-205ENST00000472223 SKOR2Q2VWA4 1001 aaPredicted RBP18.75■□□□□ 0.59
CCM2-205ENST00000472223 PADI6Q6TGC4 694 aa18.75■□□□□ 0.59
CCM2-205ENST00000472223 FMR1NBQ8N0W7 255 aaPredicted RBP18.75■□□□□ 0.59
CCM2-205ENST00000472223 MCPH1Q8NEM0 835 aa18.75■□□□□ 0.59
CCM2-205ENST00000472223 ABHD8Q96I13 439 aa18.75■□□□□ 0.59
CCM2-205ENST00000472223 TIPINQ9BVW5 301 aa18.75■□□□□ 0.59
CCM2-205ENST00000472223 SETD4Q9NVD3 440 aa18.75■□□□□ 0.59
CCM2-205ENST00000472223 HDAC6Q9UBN7 1215 aa18.75■□□□□ 0.59
CCM2-205ENST00000472223 A0A087X0B3 334 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 CCDC85CA6NKD9 419 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 ARVCFO00192 962 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 ZBTB39O15060 712 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 TLR3O15455 904 aaKnown RBP18.74■□□□□ 0.59
CCM2-205ENST00000472223 NR1I2O75469 434 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 STBD1O95210 358 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 LIG1P18858 919 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 LONRF3Q496Y0 759 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 KRBA2Q6ZNG9 492 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 KCNK18Q7Z418 384 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 SESTD1Q86VW0 696 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 GPBP1Q86WP2 473 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 METTL13Q8N6R0 699 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 TCP11Q8WWU5 503 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 CCDC47Q96A33 483 aaKnown RBP18.74■□□□□ 0.59
CCM2-205ENST00000472223 SYAP1Q96A49 352 aaPredicted RBP18.74■□□□□ 0.59
CCM2-205ENST00000472223 MTRQ99707 1265 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 ATP6V0A4Q9HBG4 840 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 BLOC1S4Q9NUP1 217 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 DACT1Q9NYF0 836 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 TUBE1Q9UJT0 475 aa18.74■□□□□ 0.59
CCM2-205ENST00000472223 SCN10AQ9Y5Y9 1956 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 TMEM150BA6NC51 233 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 USO1O60763 962 aaKnown RBP18.73■□□□□ 0.59
CCM2-205ENST00000472223 RPLP2P05387 115 aaKnown RBP18.73■□□□□ 0.59
CCM2-205ENST00000472223 MYL1P05976 194 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 KLRC1P26715 233 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 AFMP43652 599 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 E2F4Q16254 413 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 RSPH3Q86UC2 560 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 ENGASEQ8NFI3 743 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 PAWRQ96IZ0 340 aaKnown RBP18.73■□□□□ 0.59
CCM2-205ENST00000472223 SH2D3AQ9BRG2 576 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 SUGCTQ9HAC7 445 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 GTF2IRD1Q9UHL9 959 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 KCNG1Q9UIX4 513 aa18.73■□□□□ 0.59
CCM2-205ENST00000472223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms