RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 GPR32O75388 356 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 DGKIO75912 1065 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 STBD1O95210 358 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 TDP2O95551 362 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 C22orf31O95567 290 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 SIP14410 1827 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 IFNAR1P17181 557 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 FGFR4P22455 802 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 CTNNB1P35222 781 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 CLCN3P51790 818 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 HYAL1Q12794 435 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 DRP2Q13474 957 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 EARS2Q5JPH6 523 aaKnown RBP9.18□□□□□ -0.94
USP48-207ENST00000471752 PDXDC2PQ6P474 469 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 TSHZ1Q6ZSZ6 1077 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 RUFY3Q7L099 469 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 FBXL16Q8N461 479 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 LRRC71Q8N4P6 559 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 FIBCD1Q8N539 461 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 MRPL38Q96DV4 380 aaKnown RBP9.18□□□□□ -0.94
USP48-207ENST00000471752 TSPYL2Q9H2G4 693 aaPredicted RBP9.18□□□□□ -0.94
USP48-207ENST00000471752 IGFLR1Q9H665 355 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 ZNF302Q9NR11 478 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 LMCD1Q9NZU5 365 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 GABBR1Q9UBS5 961 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 ST3GAL5Q9UNP4 418 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 KCNJ14Q9UNX9 436 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 COG5Q9UP83 839 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 MAFBQ9Y5Q3 323 aaPredicted RBP9.18□□□□□ -0.94
USP48-207ENST00000471752 TRPV2Q9Y5S1 764 aa9.18□□□□□ -0.94
USP48-207ENST00000471752 IGSF9BQ9UPX0 1349 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 SMIM35A0A1B0GVV1 85 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 ESYT2A0FGR8 921 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 FAM205CA6NFA0 338 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 M0R2N6 131 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 CHMP2AO43633 222 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 CTDNEP1O95476 244 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 ITGB1P05556 798 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 HMGB1P09429 215 aaKnown RBP9.17□□□□□ -0.94
USP48-207ENST00000471752 CIITAP33076 1130 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 KRT76Q01546 638 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 NFX1Q12986 1120 aaKnown RBP9.17□□□□□ -0.94
USP48-207ENST00000471752 AP3B2Q13367 1082 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 BTG3Q14201 252 aaPredicted RBP9.17□□□□□ -0.94
USP48-207ENST00000471752 EP400NLQ6ZTU2 488 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 NIPA1Q7RTP0 329 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 ADGRD2Q7Z7M1 963 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 FAM228AQ86W67 206 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 REXO1Q8N1G1 1221 aaKnown RBP9.17□□□□□ -0.94
USP48-207ENST00000471752 LINC01465Q8N7H1 131 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 BANK1Q8NDB2 785 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 SPPL3Q8TCT6 385 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 NEK9Q8TD19 979 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 OXER1Q8TDS5 423 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 APBB2Q92870 758 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 CLP1Q92989 425 aaKnown RBP9.17□□□□□ -0.94
USP48-207ENST00000471752 OSMRQ99650 979 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 ADAMTS10Q9H324 1103 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 UNC45AQ9H3U1 944 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 C6orf50Q9HD87 102 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 ERVK-5Q9HDB9 667 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 RNF19AQ9NV58 838 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 PLAGL2Q9UPG8 496 aa9.17□□□□□ -0.94
USP48-207ENST00000471752 NID2Q14112 1375 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 TTC3P53804 2025 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 ADGRA3Q8IWK6 1321 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 GRXCR2A6NFK2 248 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 hCG_1984214I3L0E3 225 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 ZBTB39O15060 712 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 HBP1O60381 514 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 LARGE1O95461 756 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 SEC24BO95487 1268 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 FGFR1P11362 822 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 RCAN1P53805 252 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 DSC3Q14574 896 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 COL19A1Q14993 1142 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 LEXMQ3ZCV2 418 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 IER5Q5VY09 327 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 PTCRAQ6ISU1 281 aaPredicted RBP9.16□□□□□ -0.94
USP48-207ENST00000471752 LRRC55Q6ZSA7 311 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 RSPH3Q86UC2 560 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 FAM178BQ8IXR5 827 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 METTL13Q8N6R0 699 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 ZNF713Q8N859 430 aaPredicted RBP9.16□□□□□ -0.94
USP48-207ENST00000471752 KLHL23Q8NBE8 558 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 FEZF2Q8TBJ5 459 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 TBCKQ8TEA7 893 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 SLC5A5Q92911 643 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 CEP89Q96ST8 783 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 ADAM2Q99965 735 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 TPCN1Q9ULQ1 816 aa9.16□□□□□ -0.94
USP48-207ENST00000471752 KDM3AQ9Y4C1 1321 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 A0A087WWV3 80 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 C9IYK1 514 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 C5orf67F2Z3F1 127 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 EML1O00423 815 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 WNT7AO00755 349 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 PER2O15055 1255 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 SLC37A4O43826 429 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 RPS6KA5O75582 802 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms