RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 POLR3CQ9BUI4 534 aaPredicted RBP28.2■■■□□ 2.11
COL15A1-203ENST00000471477 TUFT1Q9NNX1 390 aa28.2■■■□□ 2.11
COL15A1-203ENST00000471477 ZDHHC9Q9Y397 364 aa28.2■■■□□ 2.11
COL15A1-203ENST00000471477 PP2D1A8MPX8 630 aa28.19■■■□□ 2.1
COL15A1-203ENST00000471477 IQCF3P0C7M6 154 aa28.19■■■□□ 2.1
COL15A1-203ENST00000471477 CSF2RAP15509 400 aa28.19■■■□□ 2.1
COL15A1-203ENST00000471477 SELPP16109 830 aa28.19■■■□□ 2.1
COL15A1-203ENST00000471477 YWHABP31946 246 aaKnown RBP28.19■■■□□ 2.1
COL15A1-203ENST00000471477 CHRDL2Q6WN34 429 aa28.19■■■□□ 2.1
COL15A1-203ENST00000471477 LRRC8DQ7L1W4 858 aa28.19■■■□□ 2.1
COL15A1-203ENST00000471477 DNAJB3Q8WWF6 145 aa28.19■■■□□ 2.1
COL15A1-203ENST00000471477 FAM49AQ9H0Q0 323 aaPredicted RBP28.19■■■□□ 2.1
COL15A1-203ENST00000471477 ZBTB39O15060 712 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 LYPLA2O95372 231 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 RPA1P27694 616 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 ZNF396Q96N95 335 aaPredicted RBP28.18■■■□□ 2.1
COL15A1-203ENST00000471477 DAXXQ9UER7 740 aaPredicted RBP28.18■■■□□ 2.1
COL15A1-203ENST00000471477 LOXHD1Q8IVV2 1947 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 SMIM35A0A1B0GVV1 85 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 CAND2O75155 1236 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 CTSHP09668 335 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 CDC25AP30304 524 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 CCT6AP40227 531 aaKnown RBP28.18■■■□□ 2.1
COL15A1-203ENST00000471477 NPEPPSP55786 919 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 TRAF7Q6Q0C0 670 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 RPAINQ86UA6 219 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 SNX29Q8TEQ0 813 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 CEP89Q96ST8 783 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 PRO3102Q9H379 93 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 CYP26B1Q9NR63 512 aa28.18■■■□□ 2.1
COL15A1-203ENST00000471477 TET1Q8NFU7 2136 aa28.17■■■□□ 2.1
COL15A1-203ENST00000471477 MAGEB2O15479 319 aa28.17■■■□□ 2.1
COL15A1-203ENST00000471477 MARCKSP29966 332 aaPredicted RBP28.17■■■□□ 2.1
COL15A1-203ENST00000471477 NASPP49321 788 aaPredicted RBP28.17■■■□□ 2.1
COL15A1-203ENST00000471477 GRIN1Q05586 938 aa28.17■■■□□ 2.1
COL15A1-203ENST00000471477 TBC1D8BQ0IIM8 1120 aa28.17■■■□□ 2.1
COL15A1-203ENST00000471477 PPIGQ13427 754 aaKnown RBP eCLIP28.17■■■□□ 2.1
COL15A1-203ENST00000471477 POTEGQ6S5H5 508 aa28.17■■■□□ 2.1
COL15A1-203ENST00000471477 OTUD6AQ7L8S5 288 aa28.17■■■□□ 2.1
COL15A1-203ENST00000471477 RSPH3Q86UC2 560 aa28.17■■■□□ 2.1
COL15A1-203ENST00000471477 METTL13Q8N6R0 699 aa28.17■■■□□ 2.1
COL15A1-203ENST00000471477 CEP170P1Q96L14 293 aa28.17■■■□□ 2.1
COL15A1-203ENST00000471477 TFIP11Q9UBB9 837 aaKnown RBP28.17■■■□□ 2.1
COL15A1-203ENST00000471477 COLQQ9Y215 455 aaPredicted RBP28.17■■■□□ 2.1
COL15A1-203ENST00000471477 STK24Q9Y6E0 443 aa28.17■■■□□ 2.1
COL15A1-203ENST00000471477 A0A087WWV3 80 aa28.16■■■□□ 2.1
COL15A1-203ENST00000471477 BMP8BP34820 402 aa28.16■■■□□ 2.1
COL15A1-203ENST00000471477 EPHB4P54760 987 aa28.16■■■□□ 2.1
COL15A1-203ENST00000471477 KRT79Q5XKE5 535 aa28.16■■■□□ 2.1
COL15A1-203ENST00000471477 ZNF579Q8NAF0 562 aaKnown RBP28.16■■■□□ 2.1
COL15A1-203ENST00000471477 PIGOQ8TEQ8 1089 aa28.16■■■□□ 2.1
COL15A1-203ENST00000471477 UBE2OQ9C0C9 1292 aaKnown RBP28.16■■■□□ 2.1
COL15A1-203ENST00000471477 RSPH10B2B2RC85 870 aa28.15■■■□□ 2.1
COL15A1-203ENST00000471477 RSPH10BP0C881 870 aa28.15■■■□□ 2.1
COL15A1-203ENST00000471477 SLC39A14Q15043 492 aa28.15■■■□□ 2.1
COL15A1-203ENST00000471477 ECM1Q16610 540 aa28.15■■■□□ 2.1
COL15A1-203ENST00000471477 XKR9Q5GH70 373 aa28.15■■■□□ 2.1
COL15A1-203ENST00000471477 EFCAB12Q6NXP0 572 aa28.15■■■□□ 2.1
COL15A1-203ENST00000471477 LRRC71Q8N4P6 559 aa28.15■■■□□ 2.1
COL15A1-203ENST00000471477 MMTAG2Q9BU76 263 aaKnown RBP28.15■■■□□ 2.1
COL15A1-203ENST00000471477 TCHHQ07283 1943 aa28.14■■■□□ 2.1
COL15A1-203ENST00000471477 RPLP2P05387 115 aaKnown RBP28.14■■■□□ 2.1
COL15A1-203ENST00000471477 DDIT3P35638 169 aa28.14■■■□□ 2.1
COL15A1-203ENST00000471477 RANBP2P49792 3224 aaKnown RBP28.14■■■□□ 2.1
COL15A1-203ENST00000471477 CLCN3P51790 818 aa28.14■■■□□ 2.1
COL15A1-203ENST00000471477 STK38Q15208 465 aa28.14■■■□□ 2.1
COL15A1-203ENST00000471477 DEFB128Q7Z7B8 93 aa28.14■■■□□ 2.1
COL15A1-203ENST00000471477 KIAA0319LQ8IZA0 1049 aa28.14■■■□□ 2.1
COL15A1-203ENST00000471477 LINC01465Q8N7H1 131 aa28.14■■■□□ 2.1
COL15A1-203ENST00000471477 IL23AQ9NPF7 189 aa28.14■■■□□ 2.1
COL15A1-203ENST00000471477 ANKEF1Q9NU02 776 aa28.14■■■□□ 2.1
COL15A1-203ENST00000471477 FBXO2Q9UK22 296 aaPredicted RBP28.14■■■□□ 2.1
COL15A1-203ENST00000471477 ACRP10323 421 aa28.13■■■□□ 2.09
COL15A1-203ENST00000471477 MUTP22033 750 aa28.13■■■□□ 2.09
COL15A1-203ENST00000471477 RFC2P35250 354 aa28.13■■■□□ 2.09
COL15A1-203ENST00000471477 MRPS6P82932 125 aaKnown RBP28.13■■■□□ 2.09
COL15A1-203ENST00000471477 TMEM62Q0P6H9 643 aa28.13■■■□□ 2.09
COL15A1-203ENST00000471477 MBTPS1Q14703 1052 aa28.13■■■□□ 2.09
COL15A1-203ENST00000471477 LINC00301Q8NCQ3 95 aa28.13■■■□□ 2.09
COL15A1-203ENST00000471477 VWCEQ96DN2 955 aa28.13■■■□□ 2.09
COL15A1-203ENST00000471477 AK8Q96MA6 479 aa28.13■■■□□ 2.09
COL15A1-203ENST00000471477 NACC1Q96RE7 527 aa28.13■■■□□ 2.09
COL15A1-203ENST00000471477 SUGCTQ9HAC7 445 aa28.13■■■□□ 2.09
COL15A1-203ENST00000471477 MORC2Q9Y6X9 1032 aaPredicted RBP28.13■■■□□ 2.09
COL15A1-203ENST00000471477 A0A1W2PPC1 479 aa28.12■■■□□ 2.09
COL15A1-203ENST00000471477 RBAK-RBAKDNI3L0D1 243 aa28.12■■■□□ 2.09
COL15A1-203ENST00000471477 CHRNA1P02708 482 aa28.12■■■□□ 2.09
COL15A1-203ENST00000471477 LONP1P36776 959 aaKnown RBP28.12■■■□□ 2.09
COL15A1-203ENST00000471477 DNM1Q05193 864 aaKnown RBP28.12■■■□□ 2.09
COL15A1-203ENST00000471477 MGAT3Q09327 533 aa28.12■■■□□ 2.09
COL15A1-203ENST00000471477 GPNMBQ14956 572 aa28.12■■■□□ 2.09
COL15A1-203ENST00000471477 FAM26DQ5JW98 314 aa28.12■■■□□ 2.09
COL15A1-203ENST00000471477 CCDC43Q96MW1 224 aaKnown RBP28.12■■■□□ 2.09
COL15A1-203ENST00000471477 KIAA1024Q9UPX6 916 aa28.12■■■□□ 2.09
COL15A1-203ENST00000471477 PPME1Q9Y570 386 aa28.12■■■□□ 2.09
COL15A1-203ENST00000471477 SRPRBQ9Y5M8 271 aaKnown RBP28.12■■■□□ 2.09
COL15A1-203ENST00000471477 CDY2AQ9Y6F7 541 aa28.12■■■□□ 2.09
COL15A1-203ENST00000471477 IGKV6-21A0A0C4DH24 114 aa28.11■■■□□ 2.09
COL15A1-203ENST00000471477 NBNO60934 754 aa28.11■■■□□ 2.09
COL15A1-203ENST00000471477 MAFO75444 373 aaPredicted RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms