RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 GAS7O60861 476 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 CD52P31358 61 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 JAK3P52333 1124 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 SCRN1Q12765 414 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 SKIV2LQ15477 1246 aaKnown RBP15.25■□□□□ 0.03
HMGN1-211ENST00000471260 PTPROQ16827 1216 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 EPC2Q52LR7 807 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 KIAA0319LQ8IZA0 1049 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 IL27Q8NEV9 243 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 SLC5A5Q92911 643 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 ZBTB10Q96DT7 871 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 LARP6Q9BRS8 491 aaKnown RBP15.25■□□□□ 0.03
HMGN1-211ENST00000471260 C17orf80Q9BSJ5 609 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 DISC1Q9NRI5 854 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 GABBR1Q9UBS5 961 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 MTUS1Q9ULD2 1270 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 TTC3P53804 2025 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 MYH9P35579 1960 aaKnown RBP15.25■□□□□ 0.03
HMGN1-211ENST00000471260 ZBTB42B2RXF5 422 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 H3BNC9 293 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 RB1P06400 928 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 PAK2Q13177 524 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 NONOQ15233 471 aaKnown RBP eCLIP15.24■□□□□ 0.03
HMGN1-211ENST00000471260 NPY5RQ15761 445 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 LRCH2Q5VUJ6 765 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 KRT40Q6A162 431 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 KRT25Q7Z3Z0 450 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 TMEM192Q8IY95 271 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 FIBCD1Q8N539 461 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 WASF1Q92558 559 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 ZNF689Q96CS4 500 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-211ENST00000471260 MBOAT7Q96N66 472 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 TEKT3Q9BXF9 490 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 NRBP2Q9NSY0 501 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-211ENST00000471260 PADI3Q9ULW8 664 aa15.24■□□□□ 0.03
HMGN1-211ENST00000471260 C5orf67F2Z3F1 127 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 GPR182O15218 404 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 DGKIO75912 1065 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 C22orf31O95567 290 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 STAG3L1P0CL83 205 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 TMOD1P28289 359 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 TMEM62Q0P6H9 643 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 CLP1Q92989 425 aaKnown RBP15.23■□□□□ 0.03
HMGN1-211ENST00000471260 HLA-CQ95604 372 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 TBC1D32Q96NH3 1257 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 UIMC1Q96RL1 719 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 PHF20Q9BVI0 1012 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 RC3H2Q9HBD1 1191 aaKnown RBP15.23■□□□□ 0.03
HMGN1-211ENST00000471260 TPCN1Q9ULQ1 816 aa15.23■□□□□ 0.03
HMGN1-211ENST00000471260 ADGRA3Q8IWK6 1321 aa15.22■□□□□ 0.03
HMGN1-211ENST00000471260 RPS6KA5O75582 802 aa15.22■□□□□ 0.03
HMGN1-211ENST00000471260 PSMD10O75832 226 aa15.22■□□□□ 0.03
HMGN1-211ENST00000471260 CRYBB1P53674 252 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-211ENST00000471260 B3GNT9Q6UX72 402 aa15.22■□□□□ 0.03
HMGN1-211ENST00000471260 RTN4RL1Q86UN2 441 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-211ENST00000471260 NPAS4Q8IUM7 802 aa15.22■□□□□ 0.03
HMGN1-211ENST00000471260 CRIPAKQ8N1N5 446 aa15.22■□□□□ 0.03
HMGN1-211ENST00000471260 MRPL38Q96DV4 380 aaKnown RBP15.22■□□□□ 0.03
HMGN1-211ENST00000471260 AIFM3Q96NN9 605 aa15.22■□□□□ 0.03
HMGN1-211ENST00000471260 NAP1L4Q99733 375 aaKnown RBP15.22■□□□□ 0.03
HMGN1-211ENST00000471260 TRANK1O15050 2925 aa15.22■□□□□ 0.03
HMGN1-211ENST00000471260 TNFRSF10AO00220 468 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 OATP04181 439 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 BMP1P13497 986 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 GCFC2P16383 781 aaKnown RBP15.21■□□□□ 0.03
HMGN1-211ENST00000471260 BMPR1AP36894 532 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 AK2P54819 239 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 NFX1Q12986 1120 aaKnown RBP15.21■□□□□ 0.03
HMGN1-211ENST00000471260 GPM6BQ13491 265 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 BTG3Q14201 252 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-211ENST00000471260 PPP4R3AQ6IN85 833 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 MIER3Q7Z3K6 550 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 CMTR2Q8IYT2 770 aaKnown RBP15.21■□□□□ 0.03
HMGN1-211ENST00000471260 METTL13Q8N6R0 699 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 ADAMTS19Q8TE59 1207 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 FAM20AQ96MK3 541 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 PLVAPQ9BX97 442 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 UNC45AQ9H3U1 944 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 ERVK-5Q9HDB9 667 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 C1orf112Q9NSG2 853 aa15.21■□□□□ 0.03
HMGN1-211ENST00000471260 DDX25Q9UHL0 483 aaKnown RBP15.21■□□□□ 0.03
HMGN1-211ENST00000471260 COL4A4P53420 1690 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-211ENST00000471260 EVPLQ92817 2033 aa15.21■□□□□ 0.02
HMGN1-211ENST00000471260 CCDC194A0A1B0GVG4 234 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 ZNF862O60290 1169 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 GPR32O75388 356 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 TDP2O95551 362 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 CDC42EP1Q00587 391 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 PRKCEQ02156 737 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 INF2Q27J81 1249 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 TIGD5Q53EQ6 642 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 NAALADL2Q58DX5 795 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 EFCAB12Q6NXP0 572 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 NEK8Q86SG6 692 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 LINC01465Q8N7H1 131 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 ETNPPLQ8TBG4 499 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 LINC01599Q8WXQ3 324 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 MAP7D2Q96T17 732 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 UHRF1Q96T88 793 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms