RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 IL13RA1P78552 427 aa4.87□□□□□ -1.63
CLIP4-209ENST00000471165 DBPQ10586 325 aaPredicted RBP4.87□□□□□ -1.63
CLIP4-209ENST00000471165 CXXC5Q7LFL8 322 aaKnown RBP4.87□□□□□ -1.63
CLIP4-209ENST00000471165 C19orf47Q8N9M1 422 aaKnown RBP4.87□□□□□ -1.63
CLIP4-209ENST00000471165 C1QTNF7Q9BXJ2 289 aa4.87□□□□□ -1.63
CLIP4-209ENST00000471165 TYRP1P17643 537 aa4.86□□□□□ -1.63
CLIP4-209ENST00000471165 RABGGTBP53611 331 aa4.86□□□□□ -1.63
CLIP4-209ENST00000471165 SMAD3P84022 425 aaKnown RBP4.86□□□□□ -1.63
CLIP4-209ENST00000471165 ELAVL1Q15717 326 aaKnown RBP4.86□□□□□ -1.63
CLIP4-209ENST00000471165 DENND5AQ6IQ26 1287 aa4.86□□□□□ -1.63
CLIP4-209ENST00000471165 FBXO33Q7Z6M2 555 aa4.86□□□□□ -1.63
CLIP4-209ENST00000471165 PPP1R14AQ96A00 147 aa4.86□□□□□ -1.63
CLIP4-209ENST00000471165 C16orf92Q96LL3 132 aa4.86□□□□□ -1.63
CLIP4-209ENST00000471165 FAM184BQ9ULE4 1060 aa4.86□□□□□ -1.63
CLIP4-209ENST00000471165 NUB1Q9Y5A7 615 aa4.86□□□□□ -1.63
CLIP4-209ENST00000471165 GRXCR1A8MXD5 290 aa4.85□□□□□ -1.63
CLIP4-209ENST00000471165 TBX1O43435 398 aa4.85□□□□□ -1.63
CLIP4-209ENST00000471165 KCNAB3O43448 404 aa4.85□□□□□ -1.63
CLIP4-209ENST00000471165 ITGAEP38570 1179 aa4.85□□□□□ -1.63
CLIP4-209ENST00000471165 USP14P54578 494 aa4.85□□□□□ -1.63
CLIP4-209ENST00000471165 CRELD2Q6UXH1 353 aaPredicted RBP4.85□□□□□ -1.63
CLIP4-209ENST00000471165 CCDC81Q6ZN84 652 aa4.85□□□□□ -1.63
CLIP4-209ENST00000471165 SUPT20HQ8NEM7 779 aa4.85□□□□□ -1.63
CLIP4-209ENST00000471165 RABGGTAQ92696 567 aa4.85□□□□□ -1.63
CLIP4-209ENST00000471165 ZNF778Q96MU6 729 aa4.85□□□□□ -1.63
CLIP4-209ENST00000471165 PPARGC1AQ9UBK2 798 aaKnown RBP4.85□□□□□ -1.63
CLIP4-209ENST00000471165 POLR2AP24928 1970 aaKnown RBP4.84□□□□□ -1.63
CLIP4-209ENST00000471165 CPP00450 1065 aa4.84□□□□□ -1.63
CLIP4-209ENST00000471165 COL6A2P12110 1019 aa4.84□□□□□ -1.63
CLIP4-209ENST00000471165 ZFP36P26651 326 aaKnown RBP4.84□□□□□ -1.63
CLIP4-209ENST00000471165 ZEB1P37275 1124 aaPredicted RBP4.84□□□□□ -1.63
CLIP4-209ENST00000471165 EPHA5P54756 1037 aa4.84□□□□□ -1.63
CLIP4-209ENST00000471165 TAGLNQ01995 201 aaKnown RBP4.84□□□□□ -1.63
CLIP4-209ENST00000471165 SF1Q15637 639 aaKnown RBP4.84□□□□□ -1.63
CLIP4-209ENST00000471165 TIGD2Q4W5G0 525 aa4.84□□□□□ -1.63
CLIP4-209ENST00000471165 KLHL22Q53GT1 634 aa4.84□□□□□ -1.63
CLIP4-209ENST00000471165 PLEKHG4Q58EX7 1191 aa4.84□□□□□ -1.63
CLIP4-209ENST00000471165 HTR3DQ70Z44 454 aa4.84□□□□□ -1.63
CLIP4-209ENST00000471165 OTOP2Q7RTS6 562 aa4.84□□□□□ -1.63
CLIP4-209ENST00000471165 PGBD4Q96DM1 585 aa4.84□□□□□ -1.63
CLIP4-209ENST00000471165 CRBNQ96SW2 442 aa4.84□□□□□ -1.63
CLIP4-209ENST00000471165 MNTQ99583 582 aa4.84□□□□□ -1.63
CLIP4-209ENST00000471165 SIMC1Q8NDZ2 872 aa4.83□□□□□ -1.64
CLIP4-209ENST00000471165 CNTNAP2Q9UHC6 1331 aa4.82□□□□□ -1.64
CLIP4-209ENST00000471165 GOLGA6L6A8MZA4 724 aa4.82□□□□□ -1.64
CLIP4-209ENST00000471165 NKRFO15226 690 aaKnown RBP eCLIP4.82□□□□□ -1.64
CLIP4-209ENST00000471165 STAT3P40763 770 aa4.82□□□□□ -1.64
CLIP4-209ENST00000471165 ZNF143P52747 638 aaPredicted RBP4.82□□□□□ -1.64
CLIP4-209ENST00000471165 STILQ15468 1287 aa4.82□□□□□ -1.64
CLIP4-209ENST00000471165 VHLLQ6RSH7 139 aa4.82□□□□□ -1.64
CLIP4-209ENST00000471165 KCTD1Q719H9 257 aa4.82□□□□□ -1.64
CLIP4-209ENST00000471165 ARHGAP28Q9P2N2 729 aa4.82□□□□□ -1.64
CLIP4-209ENST00000471165 NPFFR2Q9Y5X5 522 aa4.82□□□□□ -1.64
CLIP4-209ENST00000471165 A0A0G2JNJ9 132 aa4.81□□□□□ -1.64
CLIP4-209ENST00000471165 CENPVL1A0A0U1RR11 272 aa4.81□□□□□ -1.64
CLIP4-209ENST00000471165 RBMXL2O75526 392 aaKnown RBP4.81□□□□□ -1.64
CLIP4-209ENST00000471165 NAT2P11245 290 aa4.81□□□□□ -1.64
CLIP4-209ENST00000471165 KCNJ6P48051 423 aa4.81□□□□□ -1.64
CLIP4-209ENST00000471165 ERCC6LQ2NKX8 1250 aa4.81□□□□□ -1.64
CLIP4-209ENST00000471165 C1QL3Q5VWW1 255 aa4.81□□□□□ -1.64
CLIP4-209ENST00000471165 ADGRE3Q9BY15 652 aa4.81□□□□□ -1.64
CLIP4-209ENST00000471165 Q9UFV3 132 aa4.81□□□□□ -1.64
CLIP4-209ENST00000471165 DSEQ9UL01 958 aa4.81□□□□□ -1.64
CLIP4-209ENST00000471165 CBSLP0DN79 551 aa4.8□□□□□ -1.64
CLIP4-209ENST00000471165 CBSP35520 551 aa4.8□□□□□ -1.64
CLIP4-209ENST00000471165 HABP4Q5JVS0 413 aaKnown RBP4.8□□□□□ -1.64
CLIP4-209ENST00000471165 TMEM200BQ69YZ2 307 aa4.8□□□□□ -1.64
CLIP4-209ENST00000471165 FAM111BQ6SJ93 734 aa4.8□□□□□ -1.64
CLIP4-209ENST00000471165 WNK4Q96J92 1243 aa4.8□□□□□ -1.64
CLIP4-209ENST00000471165 CCDC140Q96MF4 163 aa4.8□□□□□ -1.64
CLIP4-209ENST00000471165 SERHL2Q9H4I8 314 aa4.8□□□□□ -1.64
CLIP4-209ENST00000471165 SYBUQ9NX95 663 aa4.8□□□□□ -1.64
CLIP4-209ENST00000471165 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.79□□□□□ -1.64
CLIP4-209ENST00000471165 STAT5BP51692 787 aa4.79□□□□□ -1.64
CLIP4-209ENST00000471165 SPIRE1Q08AE8 756 aa4.79□□□□□ -1.64
CLIP4-209ENST00000471165 ACAP1Q15027 740 aa4.79□□□□□ -1.64
CLIP4-209ENST00000471165 FKBP15Q5T1M5 1219 aa4.79□□□□□ -1.64
CLIP4-209ENST00000471165 TMEM145Q8NBT3 493 aa4.79□□□□□ -1.64
CLIP4-209ENST00000471165 ATXN2LQ8WWM7 1075 aaKnown RBP4.79□□□□□ -1.64
CLIP4-209ENST00000471165 C1orf159Q96HA4 380 aa4.79□□□□□ -1.64
CLIP4-209ENST00000471165 INCENPQ9NQS7 918 aa4.79□□□□□ -1.64
CLIP4-209ENST00000471165 GALNT8Q9NY28 637 aa4.79□□□□□ -1.64
CLIP4-209ENST00000471165 EPN1Q9Y6I3 576 aaPredicted RBP4.79□□□□□ -1.64
CLIP4-209ENST00000471165 MSCO60682 206 aa4.78□□□□□ -1.64
CLIP4-209ENST00000471165 GNAT1P11488 350 aa4.78□□□□□ -1.64
CLIP4-209ENST00000471165 LAG3P18627 525 aa4.78□□□□□ -1.64
CLIP4-209ENST00000471165 GFRA1P56159 465 aa4.78□□□□□ -1.64
CLIP4-209ENST00000471165 EIF6P56537 245 aaKnown RBP4.78□□□□□ -1.64
CLIP4-209ENST00000471165 ATP2C1P98194 919 aaPredicted RBP4.78□□□□□ -1.64
CLIP4-209ENST00000471165 CD83Q01151 205 aa4.78□□□□□ -1.64
CLIP4-209ENST00000471165 PPP2R5EQ16537 467 aa4.78□□□□□ -1.64
CLIP4-209ENST00000471165 CPT1CQ8TCG5 803 aa4.78□□□□□ -1.64
CLIP4-209ENST00000471165 WDR11Q9BZH6 1224 aa4.78□□□□□ -1.64
CLIP4-209ENST00000471165 LPXNO60711 386 aa4.77□□□□□ -1.65
CLIP4-209ENST00000471165 PTGS1P23219 599 aa4.77□□□□□ -1.65
CLIP4-209ENST00000471165 CXCR5P32302 372 aa4.77□□□□□ -1.65
CLIP4-209ENST00000471165 GIPRP48546 466 aa4.77□□□□□ -1.65
CLIP4-209ENST00000471165 ADCY7P51828 1080 aa4.77□□□□□ -1.65
CLIP4-209ENST00000471165 ST5P78524 1137 aa4.77□□□□□ -1.65
CLIP4-209ENST00000471165 NHLH1Q02575 133 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms