RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 ATRIPQ8WXE1 791 aa18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 OPTNQ96CV9 577 aa18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 ZNF408Q9H9D4 720 aa18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 KCNH4Q9UQ05 1017 aa18.64■□□□□ 0.57
SMARCD3-206ENST00000470588 DDX39AO00148 427 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 SLC16A3O15427 465 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 MAFGO15525 162 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 IPO7O95373 1038 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 CCND2P30279 289 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 QARSP47897 775 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 PLS1Q14651 629 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 MAP1SQ66K74 1059 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 FASTKD5Q7L8L6 764 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 ZNF720Q7Z2F6 126 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 VSIG10LQ86VR7 867 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 SYN2Q92777 582 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 IRX2Q9BZI1 471 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 RRAGCQ9HB90 399 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 ARMCX3Q9UH62 379 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 RIPK3Q9Y572 518 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 PCDHB13Q9Y5F0 798 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 NR3C1P04150 777 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 NAA30Q147X3 362 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 TREML2Q5T2D2 321 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 MNS1Q8NEH6 495 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 SMCR8Q8TEV9 937 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 BAP1Q92560 729 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 SLC10A4Q96EP9 437 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 WNK4Q96J92 1243 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 CCDC42Q96M95 316 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 ACAD9Q9H845 621 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 PKD2L1Q9P0L9 805 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 CEP72Q9P209 647 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 CGNQ9P2M7 1197 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 ZNF214Q9UL59 606 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 MRFAP1Q9Y605 127 aa18.63■□□□□ 0.57
SMARCD3-206ENST00000470588 A0A0G2JMZ2 1700 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 EPHB6O15197 1021 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 SFNP31947 248 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 JAK3P52333 1124 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 HERVK_113P62684 666 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 FKBP1BP68106 108 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 KCNH2Q12809 1159 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 TMEM132BQ14DG7 1078 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 LDLRAD1Q5T700 205 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 PDXDC1Q6P996 788 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 RRAGAQ7L523 313 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 CACNA2D4Q7Z3S7 1137 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 NLRX1Q86UT6 975 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 RDM1Q8NG50 284 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 GPRASP2Q96D09 838 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 BCAS3Q9H6U6 928 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 POLD4Q9HCU8 107 aa18.62■□□□□ 0.57
SMARCD3-206ENST00000470588 ASTN1O14525 1302 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 LOXHD1Q8IVV2 1947 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 CTAGE9A4FU28 777 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 TGFB1I1O43294 461 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 NR3C2P08235 984 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 MAPTP10636 758 aaKnown RBP18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 EPB41P11171 864 aaKnown RBP18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 OSBPP22059 807 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 NMT1P30419 496 aaKnown RBP18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 KRT76Q01546 638 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 PADI6Q6TGC4 694 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 KIAA1328Q86T90 577 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 FAM178BQ8IXR5 827 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 C4orf19Q8IY42 314 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 PDCL2Q8N4E4 241 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 FIZ1Q96SL8 496 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 TIPINQ9BVW5 301 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 LSM14BQ9BX40 385 aaKnown RBP18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 AGTPBP1Q9UPW5 1226 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 SAMM50Q9Y512 469 aa18.61■□□□□ 0.57
SMARCD3-206ENST00000470588 POTEJP0CG39 1038 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 ERCC3P19447 782 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 SNAPC2Q13487 334 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 SPA17Q15506 151 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 ODR4Q5SWX8 454 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 SLC35F6Q8N357 371 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 CCDC155Q8N6L0 562 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 CHST13Q8NET6 341 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 GOLGA5Q8TBA6 731 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 NSUN6Q8TEA1 469 aaKnown RBP18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 SENP7Q9BQF6 1050 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 CARD6Q9BX69 1037 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 TCEAL9Q9UHQ7 104 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 UTRNP46939 3433 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 EFCAB8A8MWE9 144 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 KRT86O43790 486 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 HIP1RO75146 1068 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 NOL4O94818 638 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 AFPP02771 609 aaKnown RBP18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 PSMC5P62195 406 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 ALCAMQ13740 583 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 MKNK1Q9BUB5 465 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 STRA6Q9BX79 667 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 ANKEF1Q9NU02 776 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 FBXO40Q9UH90 709 aa18.6■□□□□ 0.57
SMARCD3-206ENST00000470588 LRRC53A6NM62 1247 aa18.59■□□□□ 0.57
SMARCD3-206ENST00000470588 WDR64B1ANS9 1081 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms