RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 TMEM62Q0P6H9 643 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 TMEM266Q2M3C6 531 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 SLC24A5Q71RS6 500 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 TMC7Q7Z402 723 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 ZNF589Q86UQ0 364 aaPredicted RBP13.84□□□□□ -0.19
LSM2-209ENST00000470083 SIX5Q8N196 739 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 SEPT1Q8WYJ6 367 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 GLG1Q92896 1179 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 EVI5LQ96CN4 794 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 SMARCAD1Q9H4L7 1026 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 CYP26B1Q9NR63 512 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 DBR1Q9UK59 544 aaKnown RBP13.84□□□□□ -0.19
LSM2-209ENST00000470083 DUSP12Q9UNI6 340 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 C9IYK1 514 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 INSRRP14616 1297 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 PDE4AP27815 886 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 KRT17Q04695 432 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 NFX1Q12986 1120 aaKnown RBP13.83□□□□□ -0.2
LSM2-209ENST00000470083 TDGQ13569 410 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 SMC1AQ14683 1233 aaKnown RBP13.83□□□□□ -0.2
LSM2-209ENST00000470083 RSPO4Q2I0M5 234 aaPredicted RBP13.83□□□□□ -0.2
LSM2-209ENST00000470083 ATAT1Q5SQI0 421 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 RARS2Q5T160 578 aaKnown RBP13.83□□□□□ -0.2
LSM2-209ENST00000470083 XRRA1Q6P2D8 792 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 ZC3H14Q6PJT7 736 aaKnown RBP13.83□□□□□ -0.2
LSM2-209ENST00000470083 MRPL43Q8N983 215 aaKnown RBP13.83□□□□□ -0.2
LSM2-209ENST00000470083 ADAM2Q99965 735 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 RGS18Q9NS28 235 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 DZANK1Q9NVP4 752 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 FBXL21Q9UKT6 434 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 PCDHA2Q9Y5H9 948 aa13.83□□□□□ -0.2
LSM2-209ENST00000470083 GSTTP1A0A1W2PQM5 241 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 DENND3A2RUS2 1198 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 C2orf71A6NGG8 1288 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 CLASP2O75122 1294 aaKnown RBP13.82□□□□□ -0.2
LSM2-209ENST00000470083 KCNA2P16389 499 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 KRT76Q01546 638 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 PCNX4Q63HM2 1172 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 KCNT2Q6UVM3 1135 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 NLRX1Q86UT6 975 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 HOMER1Q86YM7 354 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 NME8Q8N427 588 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 ATP6V0A4Q9HBG4 840 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 TMEM161AQ9NX61 479 aa13.82□□□□□ -0.2
LSM2-209ENST00000470083 MAP1BP46821 2468 aaKnown RBP13.81□□□□□ -0.2
LSM2-209ENST00000470083 B4E1Z4 1266 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 ZNF213O14771 459 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 FGFR1P11362 822 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 HNRNPUQ00839 825 aaKnown RBP eCLIP13.81□□□□□ -0.2
LSM2-209ENST00000470083 ST3GAL2Q16842 350 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 SLC35G1Q2M3R5 365 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 DCLK2Q8N568 766 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 C12orf76Q8N812 135 aaPredicted RBP13.81□□□□□ -0.2
LSM2-209ENST00000470083 TNPO1Q92973 898 aaKnown RBP13.81□□□□□ -0.2
LSM2-209ENST00000470083 ACSF2Q96CM8 615 aaPredicted RBP13.81□□□□□ -0.2
LSM2-209ENST00000470083 CDHR1Q96JP9 859 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 ZNF558Q96NG5 402 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 TMEM117Q9H0C3 514 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 ELAC1Q9H777 363 aaKnown RBP13.81□□□□□ -0.2
LSM2-209ENST00000470083 MAD2L2Q9UI95 211 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 BAHCC1Q9P281 2608 aa13.81□□□□□ -0.2
LSM2-209ENST00000470083 ATRXP46100 2492 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 SMIM35A0A1B0GVV1 85 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
LSM2-209ENST00000470083 ATP9AO75110 1047 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 RPS6KA5O75582 802 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 SDHBP21912 280 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 PBX3P40426 434 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 FAM189BP81408 668 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 ODR4Q5SWX8 454 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 LRRC55Q6ZSA7 311 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 OTOP3Q7RTS5 596 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 LRRC43Q8N309 656 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 RIN2Q8WYP3 895 aaPredicted RBP13.8□□□□□ -0.2
LSM2-209ENST00000470083 GPRASP2Q96D09 838 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 PIGSQ96S52 555 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 KCNK12Q9HB15 430 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 SPG21Q9NZD8 308 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 ZSWIM5Q9P217 1185 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 NOC2LQ9Y3T9 749 aaKnown RBP13.8□□□□□ -0.2
LSM2-209ENST00000470083 SALL3Q9BXA9 1300 aa13.8□□□□□ -0.2
LSM2-209ENST00000470083 HOXA2O43364 376 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 TBC1D8BQ0IIM8 1120 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 IFIT1BQ5T764 474 aaKnown RBP13.79□□□□□ -0.2
LSM2-209ENST00000470083 KANK3Q6NY19 840 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 CCDC149Q6ZUS6 474 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 TRAPPC12Q8WVT3 735 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 TMEM40Q8WWA1 233 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 CASD1Q96PB1 797 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 PCYT2Q99447 389 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 UBAC1Q9BSL1 405 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 RIOX1Q9H6W3 641 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 WNT16Q9UBV4 365 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 ST3GAL5Q9UNP4 418 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 GINS2Q9Y248 185 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 USP24Q9UPU5 2620 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 KAT6AQ92794 2004 aa13.79□□□□□ -0.2
LSM2-209ENST00000470083 PNMA6FA0A0J9YX94 578 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms