RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 SLC9A2Q9UBY0 812 aa13.15□□□□□ -0.3
FAM228B-203ENST00000469867 CAND2O75155 1236 aa13.15□□□□□ -0.3
FAM228B-203ENST00000469867 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
FAM228B-203ENST00000469867 DNAJB3Q8WWF6 145 aa13.15□□□□□ -0.3
FAM228B-203ENST00000469867 PCYT2Q99447 389 aa13.15□□□□□ -0.3
FAM228B-203ENST00000469867 EHMT1Q9H9B1 1298 aa13.15□□□□□ -0.3
FAM228B-203ENST00000469867 INSRRP14616 1297 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 METAP2P50579 478 aaKnown RBP eCLIP13.14□□□□□ -0.31
FAM228B-203ENST00000469867 EVCP57679 992 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 ERVK-21P61565 698 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 ITGB3BPQ13352 177 aaPredicted RBP13.14□□□□□ -0.31
FAM228B-203ENST00000469867 TAF2Q6P1X5 1199 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 TRAPPC12Q8WVT3 735 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 TOP1MTQ969P6 601 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 FAM49AQ9H0Q0 323 aaPredicted RBP13.14□□□□□ -0.31
FAM228B-203ENST00000469867 AZI2Q9H6S1 392 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 COL4A4P53420 1690 aaPredicted RBP13.14□□□□□ -0.31
FAM228B-203ENST00000469867 DDX39AO00148 427 aaKnown RBP13.14□□□□□ -0.31
FAM228B-203ENST00000469867 ADAMTS3O15072 1205 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 BMP1P13497 986 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 ACTR2P61160 394 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 TMEM62Q0P6H9 643 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 JAKMIP3Q5VZ66 844 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 ZNF274Q96GC6 653 aaPredicted RBP13.14□□□□□ -0.31
FAM228B-203ENST00000469867 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 SDF4Q9BRK5 362 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 TRPC6Q9Y210 931 aa13.14□□□□□ -0.31
FAM228B-203ENST00000469867 FOSP01100 380 aaPredicted RBP13.13□□□□□ -0.31
FAM228B-203ENST00000469867 PTMSP20962 102 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 HTRA4P83105 476 aaPredicted RBP13.13□□□□□ -0.31
FAM228B-203ENST00000469867 PPP1R18Q6NYC8 613 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 PHKBQ93100 1093 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 HLA-CQ95604 372 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 MBLAC1A4D2B0 266 aaPredicted RBP13.13□□□□□ -0.31
FAM228B-203ENST00000469867 FAM86B1E9PN63 330 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 FAM86B2P0C5J1 330 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 ZNF76P36508 570 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 SREBF1P36956 1147 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 AAK1Q2M2I8 961 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 TRMT1LQ7Z2T5 733 aaKnown RBP13.13□□□□□ -0.31
FAM228B-203ENST00000469867 FBXL16Q8N461 479 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 CCDC39Q9UFE4 941 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 USP25Q9UHP3 1055 aa13.13□□□□□ -0.31
FAM228B-203ENST00000469867 SIP14410 1827 aa13.12□□□□□ -0.31
FAM228B-203ENST00000469867 MEIS1O00470 390 aa13.12□□□□□ -0.31
FAM228B-203ENST00000469867 SCG2P13521 617 aa13.12□□□□□ -0.31
FAM228B-203ENST00000469867 LPIN1Q14693 890 aa13.12□□□□□ -0.31
FAM228B-203ENST00000469867 PFKFB3Q16875 520 aaPredicted RBP13.12□□□□□ -0.31
FAM228B-203ENST00000469867 FAM26DQ5JW98 314 aa13.12□□□□□ -0.31
FAM228B-203ENST00000469867 RSPH3Q86UC2 560 aa13.12□□□□□ -0.31
FAM228B-203ENST00000469867 AGO4Q9HCK5 861 aaKnown RBP13.12□□□□□ -0.31
FAM228B-203ENST00000469867 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
FAM228B-203ENST00000469867 CDY2AQ9Y6F7 541 aa13.12□□□□□ -0.31
FAM228B-203ENST00000469867 hCG_1984214I3L0E3 225 aa13.12□□□□□ -0.31
FAM228B-203ENST00000469867 CLK2P49760 499 aaKnown RBP13.12□□□□□ -0.31
FAM228B-203ENST00000469867 STAT5BP51692 787 aa13.12□□□□□ -0.31
FAM228B-203ENST00000469867 EPC2Q52LR7 807 aa13.12□□□□□ -0.31
FAM228B-203ENST00000469867 ZNF713Q8N859 430 aaPredicted RBP13.12□□□□□ -0.31
FAM228B-203ENST00000469867 MYRIPQ8NFW9 859 aa13.12□□□□□ -0.31
FAM228B-203ENST00000469867 CCDC196A0A1B0GTZ2 297 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 CCNE2O96020 404 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 RCAN1P53805 252 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 RPAINQ86UA6 219 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 SP7Q8TDD2 431 aaPredicted RBP13.11□□□□□ -0.31
FAM228B-203ENST00000469867 APBB2Q92870 758 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 AGO3Q9H9G7 860 aaKnown RBP13.11□□□□□ -0.31
FAM228B-203ENST00000469867 COG5Q9UP83 839 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 GINS2Q9Y248 185 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 BACH1O14867 736 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 U2AF2P26368 475 aaKnown RBP eCLIP13.11□□□□□ -0.31
FAM228B-203ENST00000469867 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 MGAT3Q09327 533 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 PLCB4Q15147 1175 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 PKN1Q16512 942 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 FBXO47Q5MNV8 452 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 FAM184AQ8NB25 1140 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 RASGRP4Q8TDF6 673 aa13.11□□□□□ -0.31
FAM228B-203ENST00000469867 NFASCO94856 1347 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 TTC3P53804 2025 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 POTEB3A0JP26 581 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
FAM228B-203ENST00000469867 CD52P31358 61 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 POTEBQ6S5H4 581 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 REXO1Q8N1G1 1221 aaKnown RBP13.1□□□□□ -0.31
FAM228B-203ENST00000469867 ZMYND12Q9H0C1 365 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 CSPG5O95196 566 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 MRPS6P82932 125 aaKnown RBP13.1□□□□□ -0.31
FAM228B-203ENST00000469867 NOLC1Q14978 699 aaKnown RBP eCLIP13.1□□□□□ -0.31
FAM228B-203ENST00000469867 IER5Q5VY09 327 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
FAM228B-203ENST00000469867 GLT8D2Q9H1C3 349 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 LMCD1Q9NZU5 365 aa13.1□□□□□ -0.31
FAM228B-203ENST00000469867 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
FAM228B-203ENST00000469867 IGLV3-22A0A075B6J6 115 aa13.09□□□□□ -0.31
FAM228B-203ENST00000469867 IBSPP21815 317 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms