RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ABHD15Q6UXT9 468 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 DAW1Q8N136 415 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 ANKEF1Q9NU02 776 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 ZNF862O60290 1169 aa20.03■□□□□ 0.8
SMC4-211ENST00000469858 HOXD13P35453 343 aa20.03■□□□□ 0.8
SMC4-211ENST00000469858 NPEPPSP55786 919 aa20.03■□□□□ 0.8
SMC4-211ENST00000469858 KNOP1Q1ED39 458 aaKnown RBP20.03■□□□□ 0.8
SMC4-211ENST00000469858 ANO5Q75V66 913 aa20.03■□□□□ 0.8
SMC4-211ENST00000469858 FAM178BQ8IXR5 827 aa20.03■□□□□ 0.8
SMC4-211ENST00000469858 PARK7Q99497 189 aaKnown RBP20.03■□□□□ 0.8
SMC4-211ENST00000469858 NKRFO15226 690 aaKnown RBP eCLIP20.03■□□□□ 0.8
SMC4-211ENST00000469858 DKC1O60832 514 aaKnown RBP eCLIP20.03■□□□□ 0.8
SMC4-211ENST00000469858 SUPT20HL2P0C7V6 817 aa20.03■□□□□ 0.8
SMC4-211ENST00000469858 PPP4R3CPQ6ZMV5 832 aa20.03■□□□□ 0.8
SMC4-211ENST00000469858 NOC4LQ9BVI4 516 aaKnown RBP20.03■□□□□ 0.8
SMC4-211ENST00000469858 ITIH6Q6UXX5 1313 aa20.02■□□□□ 0.8
SMC4-211ENST00000469858 ZNF157P51786 506 aaPredicted RBP20.02■□□□□ 0.8
SMC4-211ENST00000469858 BMT2Q1RMZ1 405 aa20.02■□□□□ 0.8
SMC4-211ENST00000469858 ZC2HC1CQ53FD0 456 aaPredicted RBP20.02■□□□□ 0.8
SMC4-211ENST00000469858 CEP135Q66GS9 1140 aa20.02■□□□□ 0.8
SMC4-211ENST00000469858 ZNF507Q8TCN5 953 aa20.02■□□□□ 0.8
SMC4-211ENST00000469858 FIZ1Q96SL8 496 aa20.02■□□□□ 0.8
SMC4-211ENST00000469858 MORF4L1Q9UBU8 362 aa20.02■□□□□ 0.8
SMC4-211ENST00000469858 SYNGAP1Q96PV0 1343 aa20.02■□□□□ 0.79
SMC4-211ENST00000469858 EIF3DO15371 548 aaKnown RBP eCLIP20.01■□□□□ 0.792e-16■■■■■ 56.2
SMC4-211ENST00000469858 NRDCO43847 1150 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 FARP2O94887 1054 aaPredicted RBP20.01■□□□□ 0.79
SMC4-211ENST00000469858 ADKP55263 362 aaKnown RBP20.01■□□□□ 0.79
SMC4-211ENST00000469858 PRKCEQ02156 737 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 KCNA1Q09470 495 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 NEDD9Q14511 834 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 OTUD6AQ7L8S5 288 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 PPFIBP1Q86W92 1011 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 RASAL3Q86YV0 1011 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 IGSF9BQ9UPX0 1349 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 TGFB3P10600 412 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 NOLC1Q14978 699 aaKnown RBP eCLIP20.01■□□□□ 0.794e-16■■■■■ 30.2
SMC4-211ENST00000469858 LY6KQ17RY6 165 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 EDRF1Q3B7T1 1238 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 MIIPQ5JXC2 388 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 FBXO16Q8IX29 292 aaPredicted RBP20.01■□□□□ 0.79
SMC4-211ENST00000469858 TC2NQ8N9U0 490 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 CEP170P1Q96L14 293 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 CEP63Q96MT8 703 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 SEPT9Q9UHD8 586 aaPredicted RBP20.01■□□□□ 0.79
SMC4-211ENST00000469858 TRAF3IP3Q9Y228 551 aa20.01■□□□□ 0.79
SMC4-211ENST00000469858 GGPS1O95749 300 aa20■□□□□ 0.79
SMC4-211ENST00000469858 NR2F2P24468 414 aa20■□□□□ 0.79
SMC4-211ENST00000469858 ADORA2AP29274 412 aa20■□□□□ 0.79
SMC4-211ENST00000469858 DNM2P50570 870 aa20■□□□□ 0.79
SMC4-211ENST00000469858 RBL2Q08999 1139 aa20■□□□□ 0.79
SMC4-211ENST00000469858 CCDC40Q4G0X9 1142 aa20■□□□□ 0.79
SMC4-211ENST00000469858 STXBP4Q6ZWJ1 553 aa20■□□□□ 0.79
SMC4-211ENST00000469858 ZNF720Q7Z2F6 126 aa20■□□□□ 0.79
SMC4-211ENST00000469858 CPLX3Q8WVH0 158 aa20■□□□□ 0.79
SMC4-211ENST00000469858 ZNF302Q9NR11 478 aa20■□□□□ 0.79
SMC4-211ENST00000469858 TYW1Q9NV66 732 aaKnown RBP20■□□□□ 0.79
SMC4-211ENST00000469858 LARSQ9P2J5 1176 aaKnown RBP20■□□□□ 0.79
SMC4-211ENST00000469858 IVNS1ABPQ9Y6Y0 642 aa20■□□□□ 0.79
SMC4-211ENST00000469858 AKR1B15C9JRZ8 316 aaPredicted RBP19.99■□□□□ 0.79
SMC4-211ENST00000469858 PDXKO00764 312 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 CALUO43852 315 aaPredicted RBP19.99■□□□□ 0.79
SMC4-211ENST00000469858 STBD1O95210 358 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 ATG7O95352 703 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 ARIH2O95376 493 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 ADAM9Q13443 819 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 KSR1Q8IVT5 923 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 GPRC5CQ9NQ84 441 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.99■□□□□ 0.791e-10■■■□□ 18.8
SMC4-211ENST00000469858 ZMYM2Q9UBW7 1377 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 K7ENM7 598 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 GYPCP04921 128 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 TBC1D8BQ0IIM8 1120 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 MAN2A1Q16706 1144 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 ZC3H3Q8IXZ2 948 aaKnown RBP19.99■□□□□ 0.79
SMC4-211ENST00000469858 CCDC112Q8NEF3 446 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 MORC4Q8TE76 937 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 DRC1Q96MC2 740 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 TIPINQ9BVW5 301 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 MLXIPQ9HAP2 919 aa19.99■□□□□ 0.79
SMC4-211ENST00000469858 UBE4BO95155 1302 aa19.98■□□□□ 0.79
SMC4-211ENST00000469858 A0A1W2PQC6 194 aa19.98■□□□□ 0.79
SMC4-211ENST00000469858 ASB14A6NK59 587 aa19.98■□□□□ 0.79
SMC4-211ENST00000469858 CETN3O15182 167 aa19.98■□□□□ 0.79
SMC4-211ENST00000469858 PLS3P13797 630 aa19.98■□□□□ 0.79
SMC4-211ENST00000469858 FAM110CQ1W6H9 321 aa19.98■□□□□ 0.79
SMC4-211ENST00000469858 VWA3BQ502W6 1294 aa19.98■□□□□ 0.79
SMC4-211ENST00000469858 FAM102BQ5T8I3 360 aa19.98■□□□□ 0.79
SMC4-211ENST00000469858 KCNV1Q6PIU1 500 aa19.98■□□□□ 0.79
SMC4-211ENST00000469858 METTL7BQ6UX53 244 aa19.98■□□□□ 0.79
SMC4-211ENST00000469858 DDX41Q9UJV9 622 aaKnown RBP19.98■□□□□ 0.79
SMC4-211ENST00000469858 PCDHB13Q9Y5F0 798 aa19.98■□□□□ 0.79
SMC4-211ENST00000469858 LOC102724159A0A0B4J2E5 919 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 GNA14O95837 355 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 TPM1P09493 284 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 CASP14P31944 242 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 PWP2Q15269 919 aaKnown RBP19.97■□□□□ 0.79
SMC4-211ENST00000469858 ZNF792Q3KQV3 632 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 XKR3Q5GH77 459 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 FKBP15Q5T1M5 1219 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms