RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 DUSP11O75319 330 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 PGK1P00558 417 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 OATP04181 439 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 LGALS2P05162 132 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 C6orf222P0C671 652 aaPredicted RBP9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 SPATA31C1P0DKV0 1188 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 STAT6P42226 847 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 SYKP43405 635 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 FAM160A1Q05DH4 1040 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 MTFR1Q15390 333 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 ECM1Q16610 540 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 AMHR2Q16671 573 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 TMEM119Q4V9L6 283 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 SWSAP1Q6NVH7 229 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 ABHD15Q6UXT9 468 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 TRMT1LQ7Z2T5 733 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 METTL3Q86U44 580 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 CATSPER3Q86XQ3 398 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 TPH2Q8IWU9 490 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 ANKK1Q8NFD2 765 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 NEK9Q8TD19 979 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 GPT2Q8TD30 523 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 LRRC15Q8TF66 581 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 SEPT1Q8WYJ6 367 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 EMID1Q96A84 441 aaPredicted RBP9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 UPF3AQ9H1J1 476 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 TUFT1Q9NNX1 390 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 ZNF302Q9NR11 478 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 DDX19AQ9NUU7 478 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 WRAP73Q9P2S5 460 aaPredicted RBP9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 CCDC39Q9UFE4 941 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 KCNH3Q9ULD8 1083 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 HPSEQ9Y251 543 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 PCDHA10Q9Y5I2 948 aa9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 KIAA0100Q14667 2235 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-213ENST00000469498 TMEM150BA6NC51 233 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 CTAGE5O15320 804 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 POLR2DO15514 142 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 NR1I2O75469 434 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 ATG7O95352 703 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 P4HBP07237 508 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 MYL3P08590 195 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 CCL5P13501 91 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 MARK3P27448 753 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 RPA1P27694 616 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 QARSP47897 775 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 CPT1AP50416 773 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 CHMP4BP1P59074 171 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 PSMC5P62195 406 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 PRKCEQ02156 737 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 KCNC4Q03721 635 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 PKN2Q16513 984 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 FSCN1Q16658 493 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 RRAGBQ5VZM2 374 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 FAM160B1Q5W0V3 765 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 PDXDC2PQ6P474 469 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 NUDT18Q6ZVK8 323 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 KCNK18Q7Z418 384 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 PACS2Q86VP3 889 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 CKAP2LQ8IYA6 745 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 GLG1Q92896 1179 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 ATP6V0A1Q93050 837 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 TATDN2Q93075 761 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 PCYT2Q99447 389 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 POLR3CQ9BUI4 534 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 AZI2Q9H6S1 392 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 PRDM10Q9NQV6 1147 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 SEPT9Q9UHD8 586 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 SERTAD1Q9UHV2 236 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 KIAA1024Q9UPX6 916 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 Q9Y3F1 56 aa9.38□□□□□ -0.91
GAPVD1-213ENST00000469498 IGKV6D-21A0A0A0MT36 114 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 FAM237AA0A1B0GTK4 181 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 A6NJR5 290 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 E9PMD0 336 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 ZBTB39O15060 712 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 SLC26A4O43511 780 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 ACTN4O43707 911 aaKnown RBP9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 ZNF862O60290 1169 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 MSCO60682 206 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 KINO60870 393 aaKnown RBP9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 ADAMTS4O75173 837 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 LGR5O75473 907 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 SLITRK3O94933 977 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 ZNF202O95125 648 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 MBD3O95983 291 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 SSBP05455 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 HOXD8P13378 290 aaPredicted RBP9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 PTMSP20962 102 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 STAT5BP51692 787 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 GJA9P57773 515 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 PSMC6P62333 389 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 DHX8Q14562 1220 aaKnown RBP9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 DGKDQ16760 1214 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 BRDTQ58F21 947 aaPredicted RBP9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 HYIQ5T013 277 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 PLA2G4FQ68DD2 849 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 ZNF787Q6DD87 383 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 FMR1NBQ8N0W7 255 aaPredicted RBP9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 ENGASEQ8NFI3 743 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms