RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 ARSHQ5FYA8 562 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 MFSD14CQ5VZR4 134 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 EEPD1Q7L9B9 569 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 CCDC60Q8IWA6 550 aaPredicted RBP9.11□□□□□ -0.95
NPHP3-204ENST00000469232 DHX37Q8IY37 1157 aaKnown RBP9.11□□□□□ -0.95
NPHP3-204ENST00000469232 TRIML1Q8N9V2 468 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 KCNN1Q92952 543 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 ATP6V0A1Q93050 837 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 CDK5RAP3Q96JB5 506 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 GSDMAQ96QA5 445 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 NIFKQ9BYG3 293 aaKnown RBP9.11□□□□□ -0.95
NPHP3-204ENST00000469232 LRRC27Q9C0I9 530 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 PDLIM7Q9NR12 457 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 PKD2L1Q9P0L9 805 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 HOOK1Q9UJC3 728 aaKnown RBP9.11□□□□□ -0.95
NPHP3-204ENST00000469232 DNM3Q9UQ16 869 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 VPS9D1Q9Y2B5 631 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 PCDHA5Q9Y5H7 936 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 HTTP42858 3142 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 PVALEFA0A1B0GWK0 134 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 MYMKA6NI61 221 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 E9PMD0 336 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 DDX39AO00148 427 aaKnown RBP9.1□□□□□ -0.95
NPHP3-204ENST00000469232 SEPT4O43236 478 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 CHMP2AO43633 222 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 DUSP11O75319 330 aaKnown RBP9.1□□□□□ -0.95
NPHP3-204ENST00000469232 HMGCRP04035 888 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 GUCY2CP25092 1073 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 RARRES1P49788 294 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 ZNF131P52739 623 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 AMPD3Q01432 767 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 CYP4A11Q02928 519 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 TNFAIP2Q03169 654 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 CTTNQ14247 550 aaKnown RBP9.1□□□□□ -0.95
NPHP3-204ENST00000469232 COBLL1Q53SF7 1204 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 XKR3Q5GH77 459 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 LRSAM1Q6UWE0 723 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 C1orf186Q6ZWK4 172 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 SV2BQ7L1I2 683 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 DDX12PQ92771 950 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 COPS5Q92905 334 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 TCEAL9Q9UHQ7 104 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 FAM184BQ9ULE4 1060 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 CEP350Q5VT06 3117 aa9.1□□□□□ -0.95
NPHP3-204ENST00000469232 RHOBTB3O94955 611 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 AKR1A1P14550 325 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 BMP6P22004 513 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 TCF7P36402 384 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-204ENST00000469232 GJA9P57773 515 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 CACNB2Q08289 660 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-204ENST00000469232 PNOCQ13519 176 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 CUL4BQ13620 913 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 MORC3Q14149 939 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 MCM6Q14566 821 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 CAMK4Q16566 473 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 CT47A1Q5JQC4 288 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-204ENST00000469232 PRAMEF19Q5SWL8 479 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 RINT1Q6NUQ1 792 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 SWSAP1Q6NVH7 229 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 ANO5Q75V66 913 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 TPH2Q8IWU9 490 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 BANK1Q8NDB2 785 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 SPATA33Q96N06 139 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 EPAS1Q99814 870 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 C16orf70Q9BSU1 422 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 TIPINQ9BVW5 301 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 SLC4A5Q9BY07 1137 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 GTPBP4Q9BZE4 634 aaKnown RBP9.09□□□□□ -0.95
NPHP3-204ENST00000469232 MLXIPQ9HAP2 919 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 GABBR1Q9UBS5 961 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 PCNTO95613 3336 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 SYCE3A1L190 88 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 HAS3O00219 553 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 ZBTB39O15060 712 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 ADCY3O60266 1144 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 SMC2O95347 1197 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 MMP3P08254 477 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 CST5P28325 142 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-204ENST00000469232 YWHABP31946 246 aaKnown RBP9.09□□□□□ -0.95
NPHP3-204ENST00000469232 PLCB2Q00722 1185 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 MAPK7Q13164 816 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 GJC2Q5T442 439 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-204ENST00000469232 FAM160B1Q5W0V3 765 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 UNC13DQ70J99 1090 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 GRAMD1CQ8IYS0 662 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 KLHDC9Q8NEP7 349 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 ATP8B4Q8TF62 1192 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 AFG1LQ8WV93 481 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 FAM167AQ96KS9 214 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 PLIN2Q99541 437 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 ZBED2Q9BTP6 218 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 BHMT2Q9H2M3 363 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 SMARCAD1Q9H4L7 1026 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 ZNF302Q9NR11 478 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 MAN1B1Q9UKM7 699 aa9.09□□□□□ -0.95
NPHP3-204ENST00000469232 ZHX1Q9UKY1 873 aaPredicted RBP9.09□□□□□ -0.95
NPHP3-204ENST00000469232 ARID2Q68CP9 1835 aa9.08□□□□□ -0.96
NPHP3-204ENST00000469232 MYH9P35579 1960 aaKnown RBP9.08□□□□□ -0.96
NPHP3-204ENST00000469232 IGKV6-21A0A0C4DH24 114 aa9.08□□□□□ -0.96
NPHP3-204ENST00000469232 ZBTB42B2RXF5 422 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms