RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 GPR153Q6NV75 609 aa16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 FAM43BQ6ZT52 329 aaPredicted RBP16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 OTUD6AQ7L8S5 288 aa16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 TRMT1LQ7Z2T5 733 aaKnown RBP16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 C4orf19Q8IY42 314 aa16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 EXOC8Q8IYI6 725 aa16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 EIF2AK1Q9BQI3 630 aaKnown RBP16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 FAM49AQ9H0Q0 323 aaPredicted RBP16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 SQORQ9Y6N5 450 aa16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 ABHD14A-ACY1A0A1B0GW23 586 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 VPS37CA5D8V6 355 aaPredicted RBP16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 STBD1O95210 358 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 CHRNA1P02708 482 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 CTSHP09668 335 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 SYT1P21579 422 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 PRPHP41219 470 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 TBC1D8BQ0IIM8 1120 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 PTGDRQ13258 359 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 IKBKEQ14164 716 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 MBTPS1Q14703 1052 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 TARBP2Q15633 366 aaKnown RBP16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 KIAA0319LQ8IZA0 1049 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 METTL13Q8N6R0 699 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 C4orf32Q8N8J7 132 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 USP38Q8NB14 1042 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 ERMNQ8TAM6 284 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 SEPT8Q92599 483 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 HSD17B14Q9BPX1 270 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 JPH2Q9BR39 696 aaPredicted RBP16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 LXNQ9BS40 222 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 RAB34Q9BZG1 259 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 SEPT9Q9UHD8 586 aaPredicted RBP16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 PCDHB6Q9Y5E3 794 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 STK24Q9Y6E0 443 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 SLC4A7Q9Y6M7 1214 aa16.58■□□□□ 0.24
TMEM39A-205ENST00000468676 KDM3AQ9Y4C1 1321 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 ZBBXA8MT70 800 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 SLITRK3O94933 977 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 LYPLA2O95372 231 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 TECP42680 631 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 FXR2P51116 673 aaKnown RBP eCLIP16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 MGAT3Q09327 533 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 PDIA5Q14554 519 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 PLEKHG4Q58EX7 1191 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 APBB2Q92870 758 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 DYDC2Q96IM9 177 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 MAP7D2Q96T17 732 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 RGL1Q9NZL6 768 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 TRPV2Q9Y5S1 764 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 CDY2AQ9Y6F7 541 aa16.57■□□□□ 0.24
TMEM39A-205ENST00000468676 BMP15O95972 392 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 KCNJ6P48051 423 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 DNM2P50570 870 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 CDC42EP1Q00587 391 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 NBR1Q14596 966 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 MTERF2Q49AM1 385 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 EFCAB12Q6NXP0 572 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 ANO5Q75V66 913 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 TPH2Q8IWU9 490 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 PHOSPHO2Q8TCD6 241 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 ZBTB10Q96DT7 871 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 CELF4Q9BZC1 486 aaKnown RBP16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 TUFT1Q9NNX1 390 aa16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 CXXC1Q9P0U4 656 aaPredicted RBP16.56■□□□□ 0.24
TMEM39A-205ENST00000468676 POTEMA6NI47 508 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 SOX1O00570 391 aaPredicted RBP16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 XRCC6P12956 609 aaKnown RBP eCLIP16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 MUTP22033 750 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 YWHABP31946 246 aaKnown RBP16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 CYP4A11Q02928 519 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 CTTNQ14247 550 aaKnown RBP16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 FBXO47Q5MNV8 452 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 ODR4Q5SWX8 454 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 HAUS3Q68CZ6 603 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 DTHD1Q6ZMT9 781 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 TSHZ1Q6ZSZ6 1077 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 DBF4BQ8NFT6 615 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 SLC9A7Q96T83 725 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 POLR3CQ9BUI4 534 aaPredicted RBP16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 IFIH1Q9BYX4 1025 aaKnown RBP16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 CYP26B1Q9NR63 512 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 ANKEF1Q9NU02 776 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 FOXD4L1Q9NU39 408 aa16.55■□□□□ 0.24
TMEM39A-205ENST00000468676 IGKV6-21A0A0C4DH24 114 aa16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 STX6O43752 255 aa16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 GAS2O43903 313 aaKnown RBP16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 MAFO75444 373 aaPredicted RBP16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 ATP2A2P16615 1042 aaKnown RBP16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 RPA1P27694 616 aa16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 RFC5P40937 340 aa16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 ATP2C1P98194 919 aaPredicted RBP16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 LPIN1Q14693 890 aa16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 ARL6IP4Q66PJ3 421 aaKnown RBP16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 LINC01465Q8N7H1 131 aa16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 SLC7A3Q8WY07 619 aa16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 CEP170P1Q96L14 293 aa16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 CEP89Q96ST8 783 aa16.54■□□□□ 0.24
TMEM39A-205ENST00000468676 ZSCAN16Q9H4T2 348 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms