RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 NAP1L4Q99733 375 aaKnown RBP16.31■□□□□ 0.2
COL27A1-203ENST00000468565 GABBR1Q9UBS5 961 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 DDX25Q9UHL0 483 aaKnown RBP16.31■□□□□ 0.2
COL27A1-203ENST00000468565 SAMM50Q9Y512 469 aa16.31■□□□□ 0.2
COL27A1-203ENST00000468565 JAK2O60674 1132 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 GJB5O95377 273 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 CA3P07451 260 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 KRT2P35908 639 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 LETM2Q2VYF4 491 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 IER5Q5VY09 327 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 NME8Q8N427 588 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 OXER1Q8TDS5 423 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 FAM167AQ96KS9 214 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 OSBPL7Q9BZF2 842 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 UNC45AQ9H3U1 944 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 CDY2AQ9Y6F7 541 aa16.3■□□□□ 0.2
COL27A1-203ENST00000468565 TLL1O43897 1013 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 AMHP03971 560 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 MCTP1Q6DN14 999 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 B3GNT9Q6UX72 402 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 PIK3AP1Q6ZUJ8 805 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 ZBTB10Q96DT7 871 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 ZSCAN31Q96LW9 406 aaPredicted RBP16.29■□□□□ 0.2
COL27A1-203ENST00000468565 LLPHQ9BRT6 129 aaKnown RBP16.29■□□□□ 0.2
COL27A1-203ENST00000468565 IFIH1Q9BYX4 1025 aaKnown RBP16.29■□□□□ 0.2
COL27A1-203ENST00000468565 FAM49AQ9H0Q0 323 aaPredicted RBP16.29■□□□□ 0.2
COL27A1-203ENST00000468565 CEP131Q9UPN4 1083 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 SQORQ9Y6N5 450 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 CHD7Q9P2D1 2997 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 ZBTB42B2RXF5 422 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 MMP1P03956 469 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 KLRC1P26715 233 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 LPIN1Q14693 890 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 FBXO47Q5MNV8 452 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL27A1-203ENST00000468565 CKAP2LQ8IYA6 745 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 TNFRSF25Q93038 417 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 GAS2L1Q99501 681 aaPredicted RBP16.29■□□□□ 0.2
COL27A1-203ENST00000468565 PRDM12Q9H4Q4 367 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 TRPV2Q9Y5S1 764 aa16.29■□□□□ 0.2
COL27A1-203ENST00000468565 TTC3P53804 2025 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 KDM3AQ9Y4C1 1321 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 NLRC5Q86WI3 1866 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 M0QZ92 97 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 SLC37A4O43826 429 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 GHRP10912 638 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 MRE11P49959 708 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 PKP1Q13835 747 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 TRIM29Q14134 588 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 KLHL40Q2TBA0 621 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 TSHZ1Q6ZSZ6 1077 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 USP38Q8NB14 1042 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 MAFAQ8NHW3 353 aaPredicted RBP16.28■□□□□ 0.2
COL27A1-203ENST00000468565 GJA10Q969M2 543 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 FAM20AQ96MK3 541 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 ZBED2Q9BTP6 218 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 KCNMB3Q9NPA1 279 aa16.28■□□□□ 0.2
COL27A1-203ENST00000468565 SH2B1Q9NRF2 756 aaPredicted RBP16.28■□□□□ 0.2
COL27A1-203ENST00000468565 COL4A4P53420 1690 aaPredicted RBP16.27■□□□□ 0.2
COL27A1-203ENST00000468565 COL4A6Q14031 1691 aa16.27■□□□□ 0.2
COL27A1-203ENST00000468565 TBX3O15119 743 aa16.27■□□□□ 0.2
COL27A1-203ENST00000468565 CHMP2AO43633 222 aa16.27■□□□□ 0.2
COL27A1-203ENST00000468565 NR5A1Q13285 461 aa16.27■□□□□ 0.2
COL27A1-203ENST00000468565 EARS2Q5JPH6 523 aaKnown RBP16.27■□□□□ 0.2
COL27A1-203ENST00000468565 MIER3Q7Z3K6 550 aa16.27■□□□□ 0.2
COL27A1-203ENST00000468565 TMCO2Q7Z6W1 182 aaPredicted RBP16.27■□□□□ 0.2
COL27A1-203ENST00000468565 CCDC83Q8IWF9 413 aa16.27■□□□□ 0.2
COL27A1-203ENST00000468565 RAD9AQ99638 391 aa16.27■□□□□ 0.2
COL27A1-203ENST00000468565 RALGAPA2Q2PPJ7 1873 aa16.27■□□□□ 0.19
COL27A1-203ENST00000468565 CCNT1O60563 726 aaKnown RBP16.27■□□□□ 0.19
COL27A1-203ENST00000468565 C22orf31O95567 290 aa16.27■□□□□ 0.19
COL27A1-203ENST00000468565 OATP04181 439 aa16.27■□□□□ 0.19
COL27A1-203ENST00000468565 TAP1Q03518 808 aa16.27■□□□□ 0.19
COL27A1-203ENST00000468565 KRT40Q6A162 431 aa16.27■□□□□ 0.19
COL27A1-203ENST00000468565 CELF4Q9BZC1 486 aaKnown RBP16.27■□□□□ 0.19
COL27A1-203ENST00000468565 ZDHHC9Q9Y397 364 aa16.27■□□□□ 0.19
COL27A1-203ENST00000468565 EYSQ5T1H1 3165 aa16.26■□□□□ 0.19
COL27A1-203ENST00000468565 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-203ENST00000468565 ZNF862O60290 1169 aa16.26■□□□□ 0.19
COL27A1-203ENST00000468565 PRKCEQ02156 737 aa16.26■□□□□ 0.19
COL27A1-203ENST00000468565 DIS3L2Q8IYB7 885 aaKnown RBP16.26■□□□□ 0.19
COL27A1-203ENST00000468565 MYOCDQ8IZQ8 938 aa16.26■□□□□ 0.19
COL27A1-203ENST00000468565 NRBP2Q9NSY0 501 aa16.26■□□□□ 0.19
COL27A1-203ENST00000468565 RBAK-RBAKDNI3L0D1 243 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 MAGEB2O15479 319 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 ARHGEF15O94989 841 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 HTRA4P83105 476 aaPredicted RBP16.25■□□□□ 0.19
COL27A1-203ENST00000468565 TMEM62Q0P6H9 643 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 PPP2R5CQ13362 524 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 UGCGQ16739 394 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 FAM43BQ6ZT52 329 aaPredicted RBP16.25■□□□□ 0.19
COL27A1-203ENST00000468565 KIAA0319LQ8IZA0 1049 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 TOP1MTQ969P6 601 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 VAV3Q9UKW4 847 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 INSL6Q9Y581 213 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 LCHNA4D1U4 455 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 FAM205CA6NFA0 338 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 BTBD18B2RXH4 712 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 BRD1O95696 1058 aa16.25■□□□□ 0.19
COL27A1-203ENST00000468565 XRCC6P12956 609 aaKnown RBP eCLIP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms