RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TDO2P48775 406 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 GMPSP49915 693 aaPredicted RBP4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 CACNB3P54284 484 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 RNF4P78317 190 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 DLGAP5Q15398 846 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 SFRP5Q5T4F7 317 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 CREB3L3Q68CJ9 461 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 UNC5AQ6ZN44 842 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 TTC6Q86TZ1 520 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 MAPKAPK5Q8IW41 473 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 TEX11Q8IYF3 940 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 MAP4K1Q92918 833 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 TEKT1Q969V4 418 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 PRMT6Q96LA8 375 aaPredicted RBP4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 DHRS1Q96LJ7 313 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 KREMEN1Q96MU8 473 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 SLC6A18Q96N87 628 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 CRNKL1Q9BZJ0 848 aaKnown RBP4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 NACAP1Q9BZK3 213 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 NAPBQ9H115 298 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 TDRD3Q9H7E2 651 aaKnown RBP4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 LRRC4CQ9HCJ2 640 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 SAP30BPQ9UHR5 308 aaKnown RBP4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 PALD1Q9ULE6 856 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 RNF112Q9ULX5 631 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 SUGT1Q9Y2Z0 365 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 LRRC37AA6NMS7 1700 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 ARAP2Q8WZ64 1704 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 KIAA1551Q9HCM1 1747 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 AK9Q5TCS8 1911 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 AKAP11Q9UKA4 1901 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 SNED1Q8TER0 1413 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 DLEC1Q9Y238 1755 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 RFX7Q2KHR2 1363 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 LTBP3Q9NS15 1303 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 CYP2D7A0A087X1C5 515 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 GPR75-ASB3A0A0A6YYF3 556 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 A0A1W2PQH9 124 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 CLRN2A0PK11 232 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 GSG1L2A8MUP6 293 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 TCP10L2B9ZVM9 353 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 H7C1D1 291 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 FZD9O00144 591 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 ZNF213O14771 459 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 SLC27A2O14975 620 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 SMAD7O15105 426 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 CLEC3AO75596 197 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 STK10O94804 968 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 DDNO94850 711 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 CEACAM5P06731 702 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 CYP2D6P10635 497 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 CPA1P15085 419 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 ZKSCAN1P17029 563 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 HSPA4P34932 840 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 ETFBP38117 255 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 OXCT1P55809 520 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 FKBP1AP62942 108 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 TCP10Q12799 353 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 LRP8Q14114 963 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 NECTIN1Q15223 517 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 ZYXQ15942 572 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 IMMTQ16891 758 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 TBC1D10BQ4KMP7 808 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 RRP12Q5JTH9 1297 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 APOBEC3HQ6NTF7 200 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 CDC42EP5Q6NZY7 148 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 HHIPL2Q6UWX4 724 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 NOL8Q76FK4 1167 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 NBPF11Q86T75 865 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 TICAM2Q86XR7 235 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 TMEM192Q8IY95 271 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 MFSD4AQ8N468 514 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 FAM181AQ8N9Y4 354 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 AGBL3Q8NEM8 1001 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 JAKMIP1Q96N16 626 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 RIOK1Q9BRS2 568 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 DSCC1Q9BVC3 393 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 VEZTQ9HBM0 779 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 INCENPQ9NQS7 918 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 TOMM22Q9NS69 142 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 MCM9Q9NXL9 1143 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 ACTR10Q9NZ32 417 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 SUCOQ9UBS9 1254 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 CTNNA3Q9UI47 895 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 CNOT7Q9UIV1 285 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 SCAF8Q9UPN6 1271 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 SNX14Q9Y5W7 946 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 U3KQE9 123 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 CHD4Q14839 1912 aa4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 MYO5AQ9Y4I1 1855 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-204ENST00000468545 LTBP1Q14766 1721 aa4.8□□□□□ -1.64
TMEM39A-204ENST00000468545 COL4A5P29400 1685 aa4.8□□□□□ -1.64
TMEM39A-204ENST00000468545 MYH13Q9UKX3 1938 aa4.8□□□□□ -1.64
TMEM39A-204ENST00000468545 MYO3BQ8WXR4 1341 aa4.8□□□□□ -1.64
TMEM39A-204ENST00000468545 FAM86C2PA6NEL3 165 aa4.8□□□□□ -1.64
TMEM39A-204ENST00000468545 SMIM22K7EJ46 135 aa4.8□□□□□ -1.64
TMEM39A-204ENST00000468545 MYO1BO43795 1136 aa4.8□□□□□ -1.64
TMEM39A-204ENST00000468545 HYAL3O43820 417 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-204ENST00000468545 COBLO75128 1261 aa4.8□□□□□ -1.64
TMEM39A-204ENST00000468545 CYP21A2P08686 494 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms