RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 DKC1O60832 514 aaKnown RBP eCLIP22.77■■□□□ 1.24
TMEM53-207ENST00000468117 INHBEP58166 350 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 PRKCEQ02156 737 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 GRM1Q13255 1194 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 METTL7BQ6UX53 244 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 EPM2AIP1Q7L775 607 aaPredicted RBP22.77■■□□□ 1.24
TMEM53-207ENST00000468117 NOC3LQ8WTT2 800 aaKnown RBP22.77■■□□□ 1.24
TMEM53-207ENST00000468117 ZIC5Q96T25 663 aa22.77■■□□□ 1.24
TMEM53-207ENST00000468117 LRRC10BA6NIK2 292 aa22.76■■□□□ 1.23
TMEM53-207ENST00000468117 KIF20AO95235 890 aa22.76■■□□□ 1.23
TMEM53-207ENST00000468117 GCNT3O95395 438 aa22.76■■□□□ 1.23
TMEM53-207ENST00000468117 ZCWPW2Q504Y3 356 aa22.76■■□□□ 1.23
TMEM53-207ENST00000468117 TMEM63BQ5T3F8 832 aa22.76■■□□□ 1.23
TMEM53-207ENST00000468117 VSTM4Q8IW00 320 aa22.76■■□□□ 1.23
TMEM53-207ENST00000468117 ANKRD20A12PQ8NF67 263 aa22.76■■□□□ 1.23
TMEM53-207ENST00000468117 KCTD10Q9H3F6 313 aa22.76■■□□□ 1.23
TMEM53-207ENST00000468117 ZNF302Q9NR11 478 aa22.76■■□□□ 1.23
TMEM53-207ENST00000468117 TAB2Q9NYJ8 693 aa22.76■■□□□ 1.23
TMEM53-207ENST00000468117 TEX33O43247 280 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 PRPF6O94906 941 aaKnown RBP22.75■■□□□ 1.23
TMEM53-207ENST00000468117 NMT1P30419 496 aaKnown RBP22.75■■□□□ 1.23
TMEM53-207ENST00000468117 ODR4Q5SWX8 454 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 CCDC62Q6P9F0 684 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 OTUD6AQ7L8S5 288 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 TSG101Q99816 390 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 VPS16Q9H269 839 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.75■■□□□ 1.23
TMEM53-207ENST00000468117 SEPT9Q9UHD8 586 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-207ENST00000468117 MAFBQ9Y5Q3 323 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-207ENST00000468117 TXNP10599 105 aaKnown RBP22.75■■□□□ 1.23
TMEM53-207ENST00000468117 EEF1GP26641 437 aaKnown RBP22.75■■□□□ 1.23
TMEM53-207ENST00000468117 HOXD13P35453 343 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 COPB1P53618 953 aaKnown RBP22.75■■□□□ 1.23
TMEM53-207ENST00000468117 FAM178BQ8IXR5 827 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 CEP170P1Q96L14 293 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 FIZ1Q96SL8 496 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 KCNF1Q9H3M0 494 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 MAGEC2Q9UBF1 373 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-207ENST00000468117 SEL1LQ9UBV2 794 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 ZNF236Q9UL36 1845 aa22.75■■□□□ 1.23
TMEM53-207ENST00000468117 IGKV6D-21A0A0A0MT36 114 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 TLR2O60603 784 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 ATP4AP20648 1035 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 ARID5BQ14865 1188 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 HSDL1Q3SXM5 330 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 FILIP1LQ4L180 1135 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 CELF3Q5SZQ8 465 aaKnown RBP22.74■■□□□ 1.23
TMEM53-207ENST00000468117 PAXIP1Q6ZW49 1069 aaPredicted RBP22.74■■□□□ 1.23
TMEM53-207ENST00000468117 ZNF467Q7Z7K2 595 aaPredicted RBP22.74■■□□□ 1.23
TMEM53-207ENST00000468117 ZSCAN30Q86W11 494 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 COPS5Q92905 334 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 CNOT6LQ96LI5 555 aaKnown RBP22.74■■□□□ 1.23
TMEM53-207ENST00000468117 RTN4Q9NQC3 1192 aaKnown RBP22.74■■□□□ 1.23
TMEM53-207ENST00000468117 ZKSCAN5Q9Y2L8 839 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 ESPNB1AK53 854 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 N4BP3O15049 544 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 TCF7P36402 384 aaPredicted RBP22.74■■□□□ 1.23
TMEM53-207ENST00000468117 KCNA1Q09470 495 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 SREBF2Q12772 1141 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 TTLL4Q14679 1199 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 ZC2HC1CQ53FD0 456 aaPredicted RBP22.74■■□□□ 1.23
TMEM53-207ENST00000468117 C17orf99Q6UX52 265 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 LRRC55Q6ZSA7 311 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 SCFD2Q8WU76 684 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 MAML3Q96JK9 1138 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 PCYT2Q99447 389 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 GPRC5CQ9NQ84 441 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 IMPACTQ9P2X3 320 aa22.74■■□□□ 1.23
TMEM53-207ENST00000468117 KNOP1Q1ED39 458 aaKnown RBP22.73■■□□□ 1.23
TMEM53-207ENST00000468117 FOXR2Q6PJQ5 311 aa22.73■■□□□ 1.23
TMEM53-207ENST00000468117 FAM114A1Q8IWE2 563 aa22.73■■□□□ 1.23
TMEM53-207ENST00000468117 DHX37Q8IY37 1157 aaKnown RBP22.73■■□□□ 1.23
TMEM53-207ENST00000468117 ZNF507Q8TCN5 953 aa22.73■■□□□ 1.23
TMEM53-207ENST00000468117 SEPT1Q8WYJ6 367 aa22.73■■□□□ 1.23
TMEM53-207ENST00000468117 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.73■■□□□ 1.23
TMEM53-207ENST00000468117 SLC15A5A6NIM6 579 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 TOMM70O94826 608 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 BMT2Q1RMZ1 405 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 XKR3Q5GH77 459 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 TAPT1Q6NXT6 567 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 ZNF720Q7Z2F6 126 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 NPLOC4Q8TAT6 608 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 CYP26B1Q9NR63 512 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 NOP56O00567 594 aaKnown RBP22.72■■□□□ 1.23
TMEM53-207ENST00000468117 NKRFO15226 690 aaKnown RBP eCLIP22.72■■□□□ 1.23
TMEM53-207ENST00000468117 SNAI1O95863 264 aaPredicted RBP22.72■■□□□ 1.23
TMEM53-207ENST00000468117 LRMPQ12912 555 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 CRHR2Q13324 411 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 FAM102BQ5T8I3 360 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 CYP4F22Q6NT55 531 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 MAMDC4Q6UXC1 1216 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 CACTINQ8WUQ7 758 aaKnown RBP22.72■■□□□ 1.23
TMEM53-207ENST00000468117 HHIPL1Q96JK4 782 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 GPR20Q99678 358 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 ZFYVE28Q9HCC9 887 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 VTA1Q9NP79 307 aa22.72■■□□□ 1.23
TMEM53-207ENST00000468117 LARSQ9P2J5 1176 aaKnown RBP22.72■■□□□ 1.23
TMEM53-207ENST00000468117 DIS3Q9Y2L1 958 aaKnown RBP22.72■■□□□ 1.23
TMEM53-207ENST00000468117 EIF3DO15371 548 aaKnown RBP eCLIP22.71■■□□□ 1.23
TMEM53-207ENST00000468117 OATP04181 439 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms