RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CEP170P1Q96L14 293 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 PLIN2Q99541 437 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 CYP26B1Q9NR63 512 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 HDAC6Q9UBN7 1215 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 GTF2IRD1Q9UHL9 959 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 HPSEQ9Y251 543 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 MROH7Q68CQ1 1323 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 LOXHD1Q8IVV2 1947 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 A0A1B0GVL5 298 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 C17orf102A2RUQ5 167 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 ARHGEF35A5YM69 484 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 HOXC8P31273 242 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 TARBP2Q15633 366 aaKnown RBP16.96■□□□□ 0.31
SNIP1-202ENST00000468040 MTERF2Q49AM1 385 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 TPRNQ4KMQ1 711 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 XKR9Q5GH70 373 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 C1orf53Q5VUE5 145 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 SLC39A5Q6ZMH5 540 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 UBE2Q1Q7Z7E8 422 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 PDILTQ8N807 584 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 LMBR1Q8WVP7 490 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 BHMT2Q9H2M3 363 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 CUEDC2Q9H467 287 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
SNIP1-202ENST00000468040 A0A087X0B3 334 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 TMEM150BA6NC51 233 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 ZBTB42B2RXF5 422 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 E9PMD0 336 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 ZBTB39O15060 712 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 POLR2DO15514 142 aaKnown RBP16.95■□□□□ 0.3
SNIP1-202ENST00000468040 RFC5P40937 340 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 SYKP43405 635 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 NDUFA8P51970 172 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 SOX10P56693 466 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 IGBP1P78318 339 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 TBC1D8BQ0IIM8 1120 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 SNX17Q15036 470 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 KCNK18Q7Z418 384 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 SLC7A3Q8WY07 619 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 RAD54LQ92698 747 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 DHX58Q96C10 678 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 JPH2Q9BR39 696 aaPredicted RBP16.95■□□□□ 0.3
SNIP1-202ENST00000468040 PANK2Q9BZ23 570 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 MAGEF1Q9HAY2 307 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 SETD4Q9NVD3 440 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 TUBE1Q9UJT0 475 aa16.95■□□□□ 0.3
SNIP1-202ENST00000468040 A0A087WWV3 80 aa16.94■□□□□ 0.3
SNIP1-202ENST00000468040 MBLAC1A4D2B0 266 aaPredicted RBP16.94■□□□□ 0.3
SNIP1-202ENST00000468040 MAGEB2O15479 319 aa16.94■□□□□ 0.3
SNIP1-202ENST00000468040 GADD45BO75293 160 aaPredicted RBP16.94■□□□□ 0.3
SNIP1-202ENST00000468040 DGAT1O75907 488 aa16.94■□□□□ 0.3
SNIP1-202ENST00000468040 PLA2G4BP0C869 781 aa16.94■□□□□ 0.3
SNIP1-202ENST00000468040 CDK7P50613 346 aa16.94■□□□□ 0.3
SNIP1-202ENST00000468040 ATN1P54259 1190 aaPredicted RBP16.94■□□□□ 0.3
SNIP1-202ENST00000468040 NPEPPSP55786 919 aa16.94■□□□□ 0.3
SNIP1-202ENST00000468040 FAM160A1Q05DH4 1040 aa16.94■□□□□ 0.3
SNIP1-202ENST00000468040 SYT2Q8N9I0 419 aaPredicted RBP16.94■□□□□ 0.3
SNIP1-202ENST00000468040 RETREG2Q8NC44 543 aa16.94■□□□□ 0.3
SNIP1-202ENST00000468040 LARP4BQ92615 738 aaKnown RBP16.94■□□□□ 0.3
SNIP1-202ENST00000468040 GOLPH3LQ9H4A5 285 aa16.94■□□□□ 0.3
SNIP1-202ENST00000468040 BLOC1S4Q9NUP1 217 aa16.94■□□□□ 0.3
SNIP1-202ENST00000468040 KCND2Q9NZV8 630 aa16.94■□□□□ 0.3
SNIP1-202ENST00000468040 GAS2O43903 313 aaKnown RBP16.93■□□□□ 0.3
SNIP1-202ENST00000468040 C22orf31O95567 290 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 SSBP05455 408 aaKnown RBP eCLIP16.93■□□□□ 0.3
SNIP1-202ENST00000468040 KLRC1P26715 233 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 POLGP54098 1239 aaPredicted RBP16.93■□□□□ 0.3
SNIP1-202ENST00000468040 ADAM17P78536 824 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 E2F4Q16254 413 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 PTGISQ16647 500 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 NAALADL2Q58DX5 795 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 MARCH8Q5T0T0 291 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 GDF6Q6KF10 455 aaPredicted RBP16.93■□□□□ 0.3
SNIP1-202ENST00000468040 PADI6Q6TGC4 694 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 MTHFD1LQ6UB35 978 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 ANKRD33Q7Z3H0 272 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 CEP57L1Q8IYX8 460 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 PPP1R13LQ8WUF5 828 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 TRAPPC12Q8WVT3 735 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 CCDC34Q96HJ3 373 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 CEP89Q96ST8 783 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 SH2D3AQ9BRG2 576 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 DHX33Q9H6R0 707 aaKnown RBP16.93■□□□□ 0.3
SNIP1-202ENST00000468040 LMBRD1Q9NUN5 540 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 NOD1Q9Y239 953 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 ARID2Q68CP9 1835 aa16.93■□□□□ 0.3
SNIP1-202ENST00000468040 TLR3O15455 904 aaKnown RBP16.92■□□□□ 0.3
SNIP1-202ENST00000468040 MAFO75444 373 aaPredicted RBP16.92■□□□□ 0.3
SNIP1-202ENST00000468040 RPLP2P05387 115 aaKnown RBP16.92■□□□□ 0.3
SNIP1-202ENST00000468040 SLFN14P0C7P3 912 aa16.92■□□□□ 0.3
SNIP1-202ENST00000468040 SLC12A3P55017 1021 aa16.92■□□□□ 0.3
SNIP1-202ENST00000468040 TAF2Q6P1X5 1199 aa16.92■□□□□ 0.3
SNIP1-202ENST00000468040 SV2BQ7L1I2 683 aa16.92■□□□□ 0.3
SNIP1-202ENST00000468040 FAM126BQ8IXS8 530 aa16.92■□□□□ 0.3
SNIP1-202ENST00000468040 FMR1NBQ8N0W7 255 aaPredicted RBP16.92■□□□□ 0.3
SNIP1-202ENST00000468040 MCPH1Q8NEM0 835 aa16.92■□□□□ 0.3
SNIP1-202ENST00000468040 LRRC15Q8TF66 581 aa16.92■□□□□ 0.3
SNIP1-202ENST00000468040 TOX2Q96NM4 488 aa16.92■□□□□ 0.3
SNIP1-202ENST00000468040 LRRC27Q9C0I9 530 aa16.92■□□□□ 0.3
SNIP1-202ENST00000468040 TNMDQ9H2S6 317 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms