RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 FBXO46Q6PJ61 603 aaPredicted RBP5.51□□□□□ -1.53
SSR3-204ENST00000467733 LIPIQ6XZB0 460 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 KRT26Q7Z3Y9 468 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 USP48Q86UV5 1035 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 RASAL3Q86YV0 1011 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 FBXO27Q8NI29 283 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 ZNF296Q8WUU4 475 aaPredicted RBP5.51□□□□□ -1.53
SSR3-204ENST00000467733 CRAMP1Q96RY5 1269 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 NYXQ9GZU5 481 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 MKRN2Q9H000 416 aaKnown RBP5.51□□□□□ -1.53
SSR3-204ENST00000467733 CNNM2Q9H8M5 875 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 HDAC9Q9UKV0 1011 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 PCDHB14Q9Y5E9 798 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 SHTN1A0MZ66 631 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 ADM5C9JUS6 153 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 H7C1D1 291 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 RAD17O75943 681 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 CYBBP04839 570 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 VAV1P15498 845 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 GARTP22102 1010 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 POLR2BP30876 1174 aaKnown RBP5.5□□□□□ -1.53
SSR3-204ENST00000467733 FANCCQ00597 558 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 TNIP1Q15025 636 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 PAQR3Q6TCH7 311 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 DLK2Q6UY11 383 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 NLRC3Q7RTR2 1065 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 MORC1Q86VD1 984 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 NAT16Q8N8M0 369 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 SUPT20HQ8NEM7 779 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 RBM17Q96I25 401 aaKnown RBP5.5□□□□□ -1.53
SSR3-204ENST00000467733 JMJD8Q96S16 334 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 RTFDC1Q9BY42 306 aaPredicted RBP5.5□□□□□ -1.53
SSR3-204ENST00000467733 RNF38Q9H0F5 515 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 AP5S1Q9NUS5 200 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 SUSD2Q9UGT4 822 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 CNOT7Q9UIV1 285 aaKnown RBP5.5□□□□□ -1.53
SSR3-204ENST00000467733 MINPP1Q9UNW1 487 aa5.5□□□□□ -1.53
SSR3-204ENST00000467733 COL3A1P02461 1466 aaPredicted RBP5.5□□□□□ -1.53
SSR3-204ENST00000467733 MEIS1O00470 390 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 TLR3O15455 904 aaKnown RBP5.49□□□□□ -1.53
SSR3-204ENST00000467733 RECKO95980 971 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 GSNP06396 782 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 CTSKP43235 329 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 KIAA2012Q0VF49 1180 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 HLFQ16534 295 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 NT5DC1Q5TFE4 455 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 HLA-DQA1Q5Y7H0 255 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 FBXL19Q6PCT2 694 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 CRTC3Q6UUV7 619 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 IL17REQ8NFR9 667 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 FNIP1Q8TF40 1166 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 DPF2Q92785 391 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 ZNF512BQ96KM6 892 aaPredicted RBP5.49□□□□□ -1.53
SSR3-204ENST00000467733 BRMS1Q9HCU9 246 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 KCNQ5Q9NR82 932 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 GFOD1Q9NXC2 390 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 FBXL21Q9UKT6 434 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 FAN1Q9Y2M0 1017 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 ATP6V0A2Q9Y487 856 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 USP16Q9Y5T5 823 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 PMF1-BGLAPU3KQ54 211 aa5.49□□□□□ -1.53
SSR3-204ENST00000467733 A0A1W2PQJ5 194 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 PRAMEF22A3QJZ6 481 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 SH3D21A4FU49 640 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 YDJCA8MPS7 323 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 KCNQ3O43525 872 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 SNRPA1P09661 255 aaKnown RBP5.48□□□□□ -1.53
SSR3-204ENST00000467733 MAGEA10P43363 369 aaPredicted RBP5.48□□□□□ -1.53
SSR3-204ENST00000467733 FKBP1BP68106 108 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 MVKQ03426 396 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 TBC1D10BQ4KMP7 808 aaPredicted RBP5.48□□□□□ -1.53
SSR3-204ENST00000467733 LDLRAD1Q5T700 205 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 INTS3Q68E01 1043 aaKnown RBP5.48□□□□□ -1.53
SSR3-204ENST00000467733 CYP2R1Q6VVX0 501 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 LSRQ86X29 649 aaPredicted RBP5.48□□□□□ -1.53
SSR3-204ENST00000467733 JAMLQ86YT9 394 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 KIAA0825Q8IV33 1275 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 DCPSQ96C86 337 aaKnown RBP5.48□□□□□ -1.53
SSR3-204ENST00000467733 ATG4CQ96DT6 458 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 SPATA25Q9BR10 227 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 SPON2Q9BUD6 331 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 TMX4Q9H1E5 349 aaPredicted RBP5.48□□□□□ -1.53
SSR3-204ENST00000467733 EHMT1Q9H9B1 1298 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 ZNF609O15014 1411 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 ABCC4O15439 1325 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 UBN2Q6ZU65 1347 aa5.48□□□□□ -1.53
SSR3-204ENST00000467733 DLG5Q8TDM6 1919 aa5.47□□□□□ -1.53
SSR3-204ENST00000467733 ZNF646O15015 1829 aaPredicted RBP5.47□□□□□ -1.53
SSR3-204ENST00000467733 ERVV-1B6SEH8 477 aa5.47□□□□□ -1.53
SSR3-204ENST00000467733 PSMD14O00487 310 aa5.47□□□□□ -1.53
SSR3-204ENST00000467733 TCERG1O14776 1098 aaKnown RBP5.47□□□□□ -1.53
SSR3-204ENST00000467733 GREM1O60565 184 aa5.47□□□□□ -1.53
SSR3-204ENST00000467733 NTSR2O95665 410 aa5.47□□□□□ -1.53
SSR3-204ENST00000467733 TBC1D8O95759 1140 aa5.47□□□□□ -1.53
SSR3-204ENST00000467733 PLA2G1BP04054 148 aaKnown RBP5.47□□□□□ -1.53
SSR3-204ENST00000467733 DBHP09172 617 aa5.47□□□□□ -1.53
SSR3-204ENST00000467733 RPS12P25398 132 aaKnown RBP5.47□□□□□ -1.53
SSR3-204ENST00000467733 FOXO4P98177 505 aa5.47□□□□□ -1.53
SSR3-204ENST00000467733 APOBRQ0VD83 1088 aa5.47□□□□□ -1.53
SSR3-204ENST00000467733 AUHQ13825 339 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms