RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 LXNQ9BS40 222 aa15.26■□□□□ 0.03
SSBP1-206ENST00000467681 POLR3CQ9BUI4 534 aaPredicted RBP15.26■□□□□ 0.03
SSBP1-206ENST00000467681 DNAH12Q6ZR08 3092 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 POTEMA6NI47 508 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 NBNO60934 754 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 C22orf31O95567 290 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 FGBP02675 491 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 PFKMP08237 780 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 CYP4A11Q02928 519 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 MBTPS1Q14703 1052 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 C9orf50Q5SZB4 431 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 FAM173BQ6P4H8 233 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 OTUD6AQ7L8S5 288 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 DEFB128Q7Z7B8 93 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 CATSPER3Q86XQ3 398 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 IGSF22Q8N9C0 903 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 ERMNQ8TAM6 284 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.25■□□□□ 0.03
SSBP1-206ENST00000467681 RAB34Q9BZG1 259 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 FAM49AQ9H0Q0 323 aaPredicted RBP15.25■□□□□ 0.03
SSBP1-206ENST00000467681 TUFT1Q9NNX1 390 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 TET1Q8NFU7 2136 aa15.25■□□□□ 0.03
SSBP1-206ENST00000467681 TMEM150BA6NC51 233 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 ZBTB39O15060 712 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 CXCL10P02778 98 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 RPA1P27694 616 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 YWHABP31946 246 aaKnown RBP15.24■□□□□ 0.03
SSBP1-206ENST00000467681 NPEPPSP55786 919 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 SF3A1Q15459 793 aaKnown RBP15.24■□□□□ 0.03
SSBP1-206ENST00000467681 MTERF2Q49AM1 385 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 IER5Q5VY09 327 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 EFCAB12Q6NXP0 572 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 TDHQ8IZJ6 230 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 METTL13Q8N6R0 699 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 HERVK_113Q902F9 699 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 FTOQ9C0B1 505 aaKnown RBP eCLIP15.24■□□□□ 0.03
SSBP1-206ENST00000467681 CYP26B1Q9NR63 512 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 ANKEF1Q9NU02 776 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 LRWD1Q9UFC0 647 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 SEPT9Q9UHD8 586 aaPredicted RBP15.24■□□□□ 0.03
SSBP1-206ENST00000467681 PPME1Q9Y570 386 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 STK24Q9Y6E0 443 aa15.24■□□□□ 0.03
SSBP1-206ENST00000467681 WDR81Q562E7 1941 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 EVPLQ92817 2033 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 IGKV6-21A0A0C4DH24 114 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 MED24O75448 989 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 ZSCAN22P10073 491 aaPredicted RBP15.23■□□□□ 0.03
SSBP1-206ENST00000467681 MRPS6P82932 125 aaKnown RBP15.23■□□□□ 0.03
SSBP1-206ENST00000467681 MGAT3Q09327 533 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 TBC1D8BQ0IIM8 1120 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 PTPAQ15257 358 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 HABP4Q5JVS0 413 aaKnown RBP15.23■□□□□ 0.03
SSBP1-206ENST00000467681 RASIP1Q5U651 963 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 PSRC1Q6PGN9 363 aaPredicted RBP15.23■□□□□ 0.03
SSBP1-206ENST00000467681 LINC01465Q8N7H1 131 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 ZNF579Q8NAF0 562 aaKnown RBP15.23■□□□□ 0.03
SSBP1-206ENST00000467681 CEP170P1Q96L14 293 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 NACC1Q96RE7 527 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 SH2D3AQ9BRG2 576 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 SUGCTQ9HAC7 445 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 CLIC4Q9Y696 253 aa15.23■□□□□ 0.03
SSBP1-206ENST00000467681 A0A087WWV3 80 aa15.22■□□□□ 0.03
SSBP1-206ENST00000467681 MAFO75444 373 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-206ENST00000467681 CTSHP09668 335 aa15.22■□□□□ 0.03
SSBP1-206ENST00000467681 MUTP22033 750 aa15.22■□□□□ 0.03
SSBP1-206ENST00000467681 TMOD1P28289 359 aa15.22■□□□□ 0.03
SSBP1-206ENST00000467681 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-206ENST00000467681 XKR9Q5GH70 373 aa15.22■□□□□ 0.03
SSBP1-206ENST00000467681 PLA2G4FQ68DD2 849 aa15.22■□□□□ 0.03
SSBP1-206ENST00000467681 EXOC8Q8IYI6 725 aa15.22■□□□□ 0.03
SSBP1-206ENST00000467681 ZNF710Q8N1W2 664 aa15.22■□□□□ 0.03
SSBP1-206ENST00000467681 JPH2Q9BR39 696 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-206ENST00000467681 CELF4Q9BZC1 486 aaKnown RBP15.22■□□□□ 0.03
SSBP1-206ENST00000467681 OSBPL7Q9BZF2 842 aa15.22■□□□□ 0.03
SSBP1-206ENST00000467681 CDY2AQ9Y6F7 541 aa15.22■□□□□ 0.03
SSBP1-206ENST00000467681 KDM3AQ9Y4C1 1321 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 VWA3AA6NCI4 1184 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 F13A1P00488 732 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 CCT6AP40227 531 aaKnown RBP15.21■□□□□ 0.03
SSBP1-206ENST00000467681 PKP1Q13835 747 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 SLC39A14Q15043 492 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 ECM1Q16610 540 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 PLEKHG4Q58EX7 1191 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 FOXD4L5Q5VV16 416 aaPredicted RBP15.21■□□□□ 0.03
SSBP1-206ENST00000467681 KRT79Q5XKE5 535 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 HAUS3Q68CZ6 603 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 OTOP2Q7RTS6 562 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 PIGOQ8TEQ8 1089 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 FOXD4L4Q8WXT5 416 aaPredicted RBP15.21■□□□□ 0.03
SSBP1-206ENST00000467681 RNPC3Q96LT9 517 aaKnown RBP15.21■□□□□ 0.03
SSBP1-206ENST00000467681 USP28Q96RU2 1077 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 MMTAG2Q9BU76 263 aaKnown RBP15.21■□□□□ 0.03
SSBP1-206ENST00000467681 DHX33Q9H6R0 707 aaKnown RBP15.21■□□□□ 0.03
SSBP1-206ENST00000467681 TRPV2Q9Y5S1 764 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 SQORQ9Y6N5 450 aa15.21■□□□□ 0.03
SSBP1-206ENST00000467681 MORC2Q9Y6X9 1032 aaPredicted RBP15.21■□□□□ 0.03
SSBP1-206ENST00000467681 LTBP2Q14767 1821 aa15.2■□□□□ 0.02
SSBP1-206ENST00000467681 M0QZ92 97 aa15.2■□□□□ 0.02
SSBP1-206ENST00000467681 ACTN1P12814 892 aa15.2■□□□□ 0.02
SSBP1-206ENST00000467681 CDC25AP30304 524 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms