RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 PPME1Q9Y570 386 aa12.39□□□□□ -0.43
MSH5-212ENST00000467319 IGKV6-21A0A0C4DH24 114 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 MED24O75448 989 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 PARNO95453 639 aaKnown RBP12.38□□□□□ -0.43
MSH5-212ENST00000467319 CXCL10P02778 98 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 PFKMP08237 780 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 KLRC1P26715 233 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 RPA1P27694 616 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 DDIT3P35638 169 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 THPOP40225 353 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 TECP42680 631 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 CTTNQ14247 550 aaKnown RBP12.38□□□□□ -0.43
MSH5-212ENST00000467319 PDIA5Q14554 519 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 SF3A1Q15459 793 aaKnown RBP12.38□□□□□ -0.43
MSH5-212ENST00000467319 HAUS3Q68CZ6 603 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 PLA2G4FQ68DD2 849 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 SPRYD3Q8NCJ5 442 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 UBE2OQ9C0C9 1292 aaKnown RBP12.38□□□□□ -0.43
MSH5-212ENST00000467319 NRBP2Q9NSY0 501 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 TET1Q8NFU7 2136 aa12.38□□□□□ -0.43
MSH5-212ENST00000467319 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 MAGEB2O15479 319 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 NBNO60934 754 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 BRD1O95696 1058 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 F13A1P00488 732 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 CTSHP09668 335 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 MUTP22033 750 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 YWHABP31946 246 aaKnown RBP12.37□□□□□ -0.43
MSH5-212ENST00000467319 NASPP49321 788 aaPredicted RBP12.37□□□□□ -0.43
MSH5-212ENST00000467319 MRPS6P82932 125 aaKnown RBP12.37□□□□□ -0.43
MSH5-212ENST00000467319 C9orf50Q5SZB4 431 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 RASIP1Q5U651 963 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 PSRC1Q6PGN9 363 aaPredicted RBP12.37□□□□□ -0.43
MSH5-212ENST00000467319 POTEGQ6S5H5 508 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 DTHD1Q6ZMT9 781 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 CATSPER3Q86XQ3 398 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 KIAA0319LQ8IZA0 1049 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 TDHQ8IZJ6 230 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 RETREG2Q8NC44 543 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 DNAJB3Q8WWF6 145 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 USP28Q96RU2 1077 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 MMTAG2Q9BU76 263 aaKnown RBP12.37□□□□□ -0.43
MSH5-212ENST00000467319 RAB34Q9BZG1 259 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 FAM49AQ9H0Q0 323 aaPredicted RBP12.37□□□□□ -0.43
MSH5-212ENST00000467319 CYP26B1Q9NR63 512 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 LRWD1Q9UFC0 647 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 ZDHHC9Q9Y397 364 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 CLIC4Q9Y696 253 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 LOXHD1Q8IVV2 1947 aa12.37□□□□□ -0.43
MSH5-212ENST00000467319 PP2D1A8MPX8 630 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 RSPH10B2B2RC85 870 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 MAFO75444 373 aaPredicted RBP12.36□□□□□ -0.43
MSH5-212ENST00000467319 CHRNA1P02708 482 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 RSPH10BP0C881 870 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 CLCN3P51790 818 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 NPEPPSP55786 919 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 TBC1D8BQ0IIM8 1120 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
MSH5-212ENST00000467319 MTERF2Q49AM1 385 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 TMEM240Q5SV17 173 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 HYIQ5T013 277 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 RSPH3Q86UC2 560 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 TPH2Q8IWU9 490 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
MSH5-212ENST00000467319 ERMNQ8TAM6 284 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 AK8Q96MA6 479 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.36□□□□□ -0.439e-11■■■□□ 16.6
MSH5-212ENST00000467319 OSBPL7Q9BZF2 842 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 DHX33Q9H6R0 707 aaKnown RBP12.36□□□□□ -0.43
MSH5-212ENST00000467319 ANKEF1Q9NU02 776 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 FBXO2Q9UK22 296 aaPredicted RBP12.36□□□□□ -0.43
MSH5-212ENST00000467319 CHD9Q3L8U1 2897 aa12.36□□□□□ -0.43
MSH5-212ENST00000467319 VWA3AA6NCI4 1184 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 DDX11L8A8MPP1 907 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 ZBTB39O15060 712 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 RFC5P40937 340 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 RARRES1P49788 294 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 GRIN1Q05586 938 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 DRP2Q13474 957 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 SHHQ15465 462 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 ECM1Q16610 540 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 TCTN1Q2MV58 587 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 TRMT1LQ7Z2T5 733 aaKnown RBP12.35□□□□□ -0.43
MSH5-212ENST00000467319 LRRC71Q8N4P6 559 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 SNX29Q8TEQ0 813 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 HERVK_113Q902F9 699 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 SH2D3AQ9BRG2 576 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 DBR1Q9UK59 544 aaKnown RBP12.35□□□□□ -0.43
MSH5-212ENST00000467319 TRPV2Q9Y5S1 764 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 STK24Q9Y6E0 443 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 CDY2AQ9Y6F7 541 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 MICAL3Q7RTP6 2002 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 EVPLQ92817 2033 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 PTPRSQ13332 1948 aa12.35□□□□□ -0.43
MSH5-212ENST00000467319 RBAK-RBAKDNI3L0D1 243 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 SLC26A4O43511 780 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 YEATS4O95619 227 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 ACRP10323 421 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 XRCC6P12956 609 aaKnown RBP eCLIP12.34□□□□□ -0.43
MSH5-212ENST00000467319 LONP1P36776 959 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms