RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SLC25A43Q8WUT9 341 aaPredicted RBP6.43□□□□□ -1.38
XRN1-206ENST00000467077 PACSIN3Q9UKS6 424 aa6.43□□□□□ -1.38
XRN1-206ENST00000467077 SH3BP1Q9Y3L3 701 aa6.43□□□□□ -1.38
XRN1-206ENST00000467077 ZAR1LA6NP61 321 aa6.42□□□□□ -1.38
XRN1-206ENST00000467077 KRTAP29-1A8MX34 341 aaPredicted RBP6.42□□□□□ -1.38
XRN1-206ENST00000467077 DLX3O60479 287 aa6.42□□□□□ -1.38
XRN1-206ENST00000467077 CDK4P11802 303 aa6.42□□□□□ -1.38
XRN1-206ENST00000467077 CD38P28907 300 aa6.42□□□□□ -1.38
XRN1-206ENST00000467077 SCNN1GP51170 649 aa6.42□□□□□ -1.38
XRN1-206ENST00000467077 STILQ15468 1287 aa6.42□□□□□ -1.38
XRN1-206ENST00000467077 STRIP1Q5VSL9 837 aa6.42□□□□□ -1.38
XRN1-206ENST00000467077 MRM1Q6IN84 353 aaKnown RBP6.42□□□□□ -1.38
XRN1-206ENST00000467077 Q6ZRM9 215 aa6.42□□□□□ -1.38
XRN1-206ENST00000467077 MRGPREQ86SM8 312 aa6.42□□□□□ -1.38
XRN1-206ENST00000467077 IFNL3Q8IZI9 196 aa6.42□□□□□ -1.38
XRN1-206ENST00000467077 WNK4Q96J92 1243 aa6.42□□□□□ -1.38
XRN1-206ENST00000467077 AGO3Q9H9G7 860 aaKnown RBP6.42□□□□□ -1.38
XRN1-206ENST00000467077 PRAMEF25A6NGN4 478 aa6.41□□□□□ -1.38
XRN1-206ENST00000467077 TOB2Q14106 344 aaPredicted RBP6.41□□□□□ -1.38
XRN1-206ENST00000467077 FXNQ16595 210 aa6.41□□□□□ -1.38
XRN1-206ENST00000467077 TMEM200BQ69YZ2 307 aa6.41□□□□□ -1.38
XRN1-206ENST00000467077 KCNT2Q6UVM3 1135 aa6.41□□□□□ -1.38
XRN1-206ENST00000467077 GSPT2Q8IYD1 628 aaKnown RBP6.41□□□□□ -1.38
XRN1-206ENST00000467077 BTBD2Q9BX70 525 aa6.41□□□□□ -1.38
XRN1-206ENST00000467077 IPPKQ9H8X2 491 aa6.41□□□□□ -1.38
XRN1-206ENST00000467077 SRPK3Q9UPE1 567 aa6.41□□□□□ -1.38
XRN1-206ENST00000467077 ATP23Q9Y6H3 246 aa6.41□□□□□ -1.38
XRN1-206ENST00000467077 AOAHP28039 575 aa6.4□□□□□ -1.38
XRN1-206ENST00000467077 PTPAQ15257 358 aa6.4□□□□□ -1.38
XRN1-206ENST00000467077 SLC10A6Q3KNW5 377 aa6.4□□□□□ -1.38
XRN1-206ENST00000467077 BHLHA9Q7RTU4 235 aa6.4□□□□□ -1.38
XRN1-206ENST00000467077 ADGRG3Q86Y34 549 aa6.4□□□□□ -1.38
XRN1-206ENST00000467077 SH3RF2Q8TEC5 729 aa6.4□□□□□ -1.38
XRN1-206ENST00000467077 FAM90A27PA6NNH2 459 aa6.39□□□□□ -1.39
XRN1-206ENST00000467077 FAM20BO75063 409 aa6.39□□□□□ -1.39
XRN1-206ENST00000467077 CAPNS1P04632 268 aa6.39□□□□□ -1.39
XRN1-206ENST00000467077 MC4RP32245 332 aa6.39□□□□□ -1.39
XRN1-206ENST00000467077 STAT5BP51692 787 aa6.39□□□□□ -1.39
XRN1-206ENST00000467077 CD83Q01151 205 aa6.39□□□□□ -1.39
XRN1-206ENST00000467077 LY6G5CQ5SRR4 150 aa6.39□□□□□ -1.39
XRN1-206ENST00000467077 GRAMD4Q6IC98 578 aa6.39□□□□□ -1.39
XRN1-206ENST00000467077 METTL16Q86W50 562 aaKnown RBP6.39□□□□□ -1.39
XRN1-206ENST00000467077 RABGGTAQ92696 567 aa6.39□□□□□ -1.39
XRN1-206ENST00000467077 GPR87Q9BY21 358 aa6.39□□□□□ -1.39
XRN1-206ENST00000467077 A0A1W2PQU0 124 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 PPFIA4O75335 1185 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 RECKO95980 971 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 SMAD3P84022 425 aaKnown RBP6.38□□□□□ -1.39
XRN1-206ENST00000467077 MOGSQ13724 837 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 HSP90AA2PQ14568 343 aaPredicted RBP6.38□□□□□ -1.39
XRN1-206ENST00000467077 FIGNQ5HY92 759 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 EPHA10Q5JZY3 1008 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 DPH6Q7L8W6 267 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 VRK3Q8IV63 474 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 ZNF276Q8N554 614 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 PROKR1Q8TCW9 393 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 LENG9Q96B70 501 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 OR10A5Q9H207 317 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 INPP5FQ9Y2H2 1132 aa6.38□□□□□ -1.39
XRN1-206ENST00000467077 ABHD16AO95870 558 aa6.37□□□□□ -1.39
XRN1-206ENST00000467077 ZNF37AP17032 561 aaPredicted RBP6.37□□□□□ -1.39
XRN1-206ENST00000467077 ITGB6P18564 788 aa6.37□□□□□ -1.39
XRN1-206ENST00000467077 ECE1P42892 770 aa6.37□□□□□ -1.39
XRN1-206ENST00000467077 ELAVL1Q15717 326 aaKnown RBP6.37□□□□□ -1.39
XRN1-206ENST00000467077 KANK2Q63ZY3 851 aa6.37□□□□□ -1.39
XRN1-206ENST00000467077 STYK1Q6J9G0 422 aa6.37□□□□□ -1.39
XRN1-206ENST00000467077 KCNV1Q6PIU1 500 aa6.37□□□□□ -1.39
XRN1-206ENST00000467077 ARHGAP36Q6ZRI8 547 aa6.37□□□□□ -1.39
XRN1-206ENST00000467077 NT5DC4Q86YG4 428 aa6.37□□□□□ -1.39
XRN1-206ENST00000467077 LPPQ93052 612 aa6.37□□□□□ -1.39
XRN1-206ENST00000467077 BBC3Q96PG8 261 aaPredicted RBP6.37□□□□□ -1.39
XRN1-206ENST00000467077 MRVI1Q9Y6F6 885 aa6.37□□□□□ -1.39
XRN1-206ENST00000467077 SSBP05455 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
XRN1-206ENST00000467077 HERVK_113P62684 666 aa6.36□□□□□ -1.39
XRN1-206ENST00000467077 GPR19Q15760 415 aa6.36□□□□□ -1.39
XRN1-206ENST00000467077 GAREM2Q75VX8 874 aa6.36□□□□□ -1.39
XRN1-206ENST00000467077 AARSD1Q9BTE6 412 aaKnown RBP6.36□□□□□ -1.39
XRN1-206ENST00000467077 TCRBV5S4A2TA0A5A2 114 aa6.35□□□□□ -1.39
XRN1-206ENST00000467077 KRTAP10-9P60411 292 aa6.35□□□□□ -1.39
XRN1-206ENST00000467077 MAP3K12Q12852 859 aa6.35□□□□□ -1.39
XRN1-206ENST00000467077 RABL3Q5HYI8 236 aa6.35□□□□□ -1.39
XRN1-206ENST00000467077 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
XRN1-206ENST00000467077 MLST8Q9BVC4 326 aa6.35□□□□□ -1.39
XRN1-206ENST00000467077 UCKL1Q9NWZ5 548 aa6.35□□□□□ -1.39
XRN1-206ENST00000467077 PRODHO43272 600 aa6.34□□□□□ -1.39
XRN1-206ENST00000467077 SAFB2Q14151 953 aaKnown RBP eCLIP6.34□□□□□ -1.39
XRN1-206ENST00000467077 LRSAM1Q6UWE0 723 aa6.34□□□□□ -1.39
XRN1-206ENST00000467077 LRRC55Q6ZSA7 311 aa6.34□□□□□ -1.39
XRN1-206ENST00000467077 CATSPERZQ9NTU4 200 aa6.34□□□□□ -1.39
XRN1-206ENST00000467077 BTBD7Q9P203 1132 aa6.34□□□□□ -1.39
XRN1-206ENST00000467077 GOLGA6L6A8MZA4 724 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 INO80B-WBP1J3KQ70 363 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 MAN2B1O00754 1011 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 B3GALT2O43825 422 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 GJB6O95452 261 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 ITGB1P05556 798 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 STAT3P40763 770 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 IFRD2Q12894 506 aaPredicted RBP6.33□□□□□ -1.4
XRN1-206ENST00000467077 PAK1Q13153 545 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 ADAM15Q13444 863 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms