RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 ALCAMQ13740 583 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 CACNA2D4Q7Z3S7 1137 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 PURBQ96QR8 312 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 SYT17Q9BSW7 474 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 BCAS3Q9H6U6 928 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 A1CFQ9NQ94 594 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 LARSQ9P2J5 1176 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 REXO2Q9Y3B8 237 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 PAPPA2Q9BXP8 1791 aa22.53■■□□□ 1.2
CCDC78-207ENST00000466708 TGFB1I1O43294 461 aa22.53■■□□□ 1.2
CCDC78-207ENST00000466708 ARHGAP25P42331 645 aa22.53■■□□□ 1.2
CCDC78-207ENST00000466708 MAPK7Q13164 816 aa22.53■■□□□ 1.2
CCDC78-207ENST00000466708 ZNF710Q8N1W2 664 aa22.53■■□□□ 1.2
CCDC78-207ENST00000466708 GOLGA5Q8TBA6 731 aa22.53■■□□□ 1.2
CCDC78-207ENST00000466708 BAP1Q92560 729 aa22.53■■□□□ 1.2
CCDC78-207ENST00000466708 SYN2Q92777 582 aaPredicted RBP22.53■■□□□ 1.2
CCDC78-207ENST00000466708 PTPRFP10586 1907 aa22.53■■□□□ 1.2
CCDC78-207ENST00000466708 XRCC5P13010 732 aaKnown RBP22.52■■□□□ 1.2
CCDC78-207ENST00000466708 YWHABP31946 246 aaKnown RBP22.52■■□□□ 1.2
CCDC78-207ENST00000466708 TUBB2AQ13885 445 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 PLS1Q14651 629 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 HS2ST1Q7LGA3 356 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 CCDC155Q8N6L0 562 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 CCDC42Q96M95 316 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 CCDC43Q96MW1 224 aaKnown RBP22.52■■□□□ 1.2
CCDC78-207ENST00000466708 MKNK1Q9BUB5 465 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 TUBB2BQ9BVA1 445 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 STRA6Q9BX79 667 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 ANKEF1Q9NU02 776 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 ZMYM2Q9UBW7 1377 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 LOC285556D6RIA3 1793 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 A0A0U1RQJ8 604 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 ADM5C9JUS6 153 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 AKAP3O75969 853 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 AFPP02771 609 aaKnown RBP22.52■■□□□ 1.2
CCDC78-207ENST00000466708 KCNA1Q09470 495 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 ZC2HC1CQ53FD0 456 aaPredicted RBP22.52■■□□□ 1.2
CCDC78-207ENST00000466708 PDXDC1Q6P996 788 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 RRAGAQ7L523 313 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 DAW1Q8N136 415 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 ATRIPQ8WXE1 791 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 IWS1Q96ST2 819 aa22.52■■□□□ 1.2
CCDC78-207ENST00000466708 MOV10L1Q9BXT6 1211 aaKnown RBP22.52■■□□□ 1.2
CCDC78-207ENST00000466708 IRX2Q9BZI1 471 aaPredicted RBP22.52■■□□□ 1.2
CCDC78-207ENST00000466708 DKC1O60832 514 aaKnown RBP eCLIP22.51■■□□□ 1.19
CCDC78-207ENST00000466708 CCNE2O96020 404 aa22.51■■□□□ 1.19
CCDC78-207ENST00000466708 PPATQ06203 517 aa22.51■■□□□ 1.19
CCDC78-207ENST00000466708 ZNF569Q5MCW4 686 aa22.51■■□□□ 1.19
CCDC78-207ENST00000466708 C9orf131Q5VYM1 1079 aa22.51■■□□□ 1.19
CCDC78-207ENST00000466708 DPY19L2Q6NUT2 758 aa22.51■■□□□ 1.19
CCDC78-207ENST00000466708 LBX2Q6XYB7 198 aa22.51■■□□□ 1.19
CCDC78-207ENST00000466708 SMAP1Q8IYB5 467 aaPredicted RBP22.51■■□□□ 1.19
CCDC78-207ENST00000466708 DNERQ8NFT8 737 aa22.51■■□□□ 1.19
CCDC78-207ENST00000466708 GBP3Q9H0R5 595 aa22.51■■□□□ 1.19
CCDC78-207ENST00000466708 FBXO40Q9UH90 709 aa22.51■■□□□ 1.19
CCDC78-207ENST00000466708 PCDHA10Q9Y5I2 948 aa22.51■■□□□ 1.19
CCDC78-207ENST00000466708 NFASCO94856 1347 aa22.51■■□□□ 1.19
CCDC78-207ENST00000466708 LRRC53A6NM62 1247 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 PPP1R37O75864 691 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 PSMC2P35998 433 aaKnown RBP22.5■■□□□ 1.19
CCDC78-207ENST00000466708 HERVK_113P62684 666 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 GNPTABQ3T906 1256 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 USP50Q70EL3 339 aaPredicted RBP22.5■■□□□ 1.19
CCDC78-207ENST00000466708 PROCA1Q8NCQ7 364 aaPredicted RBP22.5■■□□□ 1.19
CCDC78-207ENST00000466708 LSM14BQ9BX40 385 aaKnown RBP22.5■■□□□ 1.19
CCDC78-207ENST00000466708 MRFAP1Q9Y605 127 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 OTOFQ9HC10 1997 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 CLIC2O15247 247 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 KRT86O43790 486 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 NOL4O94818 638 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 NF2P35240 595 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 MYBPC2Q14324 1141 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 ZC3H15Q8WU90 426 aaKnown RBP22.5■■□□□ 1.19
CCDC78-207ENST00000466708 L3MBTL3Q96JM7 780 aaPredicted RBP22.5■■□□□ 1.19
CCDC78-207ENST00000466708 DRC1Q96MC2 740 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 PLCB1Q9NQ66 1216 aa22.5■■□□□ 1.19
CCDC78-207ENST00000466708 CTAGE9A4FU28 777 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 PLS3P13797 630 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 KCNA2P16389 499 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 SPA17Q15506 151 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 TREML2Q5T2D2 321 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 KIAA1328Q86T90 577 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 ERO1BQ86YB8 467 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 SLC9A9Q8IVB4 645 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 EHBP1Q8NDI1 1231 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 SLC17A8Q8NDX2 589 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 TMEM206Q9H813 350 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 DMAC2Q9NW81 257 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 ARHGAP20Q9P2F6 1191 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 KIAA1217Q5T5P2 1943 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 PFASO15067 1338 aa22.49■■□□□ 1.19
CCDC78-207ENST00000466708 SSU72P8A0A1W2PR75 194 aa22.48■■□□□ 1.19
CCDC78-207ENST00000466708 CXCL11O14625 94 aa22.48■■□□□ 1.19
CCDC78-207ENST00000466708 RGS20O76081 388 aa22.48■■□□□ 1.19
CCDC78-207ENST00000466708 LCA5LO95447 670 aa22.48■■□□□ 1.19
CCDC78-207ENST00000466708 YBX3P16989 372 aaKnown RBP eCLIP22.48■■□□□ 1.19
CCDC78-207ENST00000466708 UGCGQ16739 394 aa22.48■■□□□ 1.19
CCDC78-207ENST00000466708 RIOX2Q8IUF8 465 aa22.48■■□□□ 1.19
CCDC78-207ENST00000466708 ANKRD13AQ8IZ07 590 aa22.48■■□□□ 1.19
CCDC78-207ENST00000466708 MNS1Q8NEH6 495 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms