RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 VASNQ6EMK4 673 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 CD300LDQ6UXZ3 194 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 KANSL1Q7Z3B3 1105 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 TMC6Q7Z403 805 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 PROSER1Q86XN7 944 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 CMIPQ8IY22 773 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 CPA6Q8N4T0 437 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 ERCC4Q92889 916 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 RAX2Q96IS3 184 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 TMEM209Q96SK2 561 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 MS4A5Q9H3V2 200 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 SIRT5Q9NXA8 310 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 PNMA8BQ9ULN7 279 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 GIT1Q9Y2X7 761 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 ZNF839A8K0R7 811 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 MPIG6BO95866 241 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 PRLP01236 227 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 TMEM253P0C7T8 217 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 PFKLP17858 780 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 ITGB5P18084 799 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 FBLN1P23142 703 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 BCAR1P56945 870 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 MRPS9P82933 396 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 PFKPQ01813 784 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 UGT8Q16880 541 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 FAM102BQ5T8I3 360 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 EFCAB2Q5VUJ9 269 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 NXNQ6DKJ4 435 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 CXorf57Q6NSI4 855 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 KIAA1841Q6NSI8 718 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 MPZL3Q6UWV2 235 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 LDHDQ86WU2 507 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 TCEAL8Q8IYN2 117 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 MYO1HQ8N1T3 1032 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 JPH3Q8WXH2 748 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 FAM168AQ92567 244 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 TSR2Q969E8 191 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 MYL10Q9BUA6 226 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 BTBD2Q9BX70 525 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 RTFDC1Q9BY42 306 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 ANO3Q9BYT9 981 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 BCAS3Q9H6U6 928 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 INCENPQ9NQS7 918 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 DLL4Q9NR61 685 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 UCKL1Q9NWZ5 548 aa5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 LUC7L2Q9Y383 392 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-211ENST00000466538 PRSS38A1L453 326 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 LCHNA4D1U4 455 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 GOLGA6CA6NDK9 693 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 GOLGA6BA6NDN3 693 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 ZNF503-AS2A6NEH8 195 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 ELL2O00472 640 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 PCDHGA12O60330 932 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 H2AFYO75367 372 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 MAFO75444 373 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 PAPLNO95428 1278 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 SCGB1D2O95969 90 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 CT47B1P0C2W7 299 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 GOLGA6DP0CG33 693 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 STAT5AP42229 794 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 ECE1P42892 770 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 ZNF200P98182 395 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 SLC6A3Q01959 620 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 ADCY2Q08462 1091 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 HLTFQ14527 1009 aaKnown RBP eCLIP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 LRRC41Q15345 812 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 SLFN12LQ6IEE8 588 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 DPP8Q6V1X1 898 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 CXXC5Q7LFL8 322 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 ZNF605Q86T29 641 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 NBPF11Q86T75 865 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 WDR48Q8TAF3 677 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 RPGRQ92834 1020 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 NUP88Q99567 741 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 AMNQ9BXJ7 453 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 RHOBTB2Q9BYZ6 727 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 SEMA4AQ9H3S1 761 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 POFUT1Q9H488 388 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 SLC39A2Q9NP94 309 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 ZNF277Q9NRM2 450 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 CCM2LQ9NUG4 571 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 DNAJC28Q9NX36 388 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 GOLGA6AQ9NYA3 693 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 IP6K2Q9UHH9 426 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 PCDHGA9Q9Y5G4 932 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 PCDHGA8Q9Y5G5 932 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 PCDHGA7Q9Y5G6 932 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 PCDHGA6Q9Y5G7 932 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 PCDHGA3Q9Y5H0 932 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 PCDHGA2Q9Y5H1 932 aa5.77□□□□□ -1.49
CDC42BPA-211ENST00000466538 ST20-MTHFSA0A0A6YYL1 179 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 TEX51A0A1B0GUA7 166 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 CYP2C8P10632 490 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 APEX1P27695 318 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 MTNR1BP49286 362 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 CLUL1Q15846 466 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 CT83Q5H943 113 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 KCNK18Q7Z418 384 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 B3GNT8Q7Z7M8 397 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms