RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 RTEL1Q9NZ71 1219 aa10.64□□□□□ -0.71
ABCF3-205ENST00000466416 BAHCC1Q9P281 2608 aa10.64□□□□□ -0.71
ABCF3-205ENST00000466416 DENND3A2RUS2 1198 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 C2orf71A6NGG8 1288 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 PRR5-ARHGAP8B1AHC4 643 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 C9IYK1 514 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 CLASP2O75122 1294 aaKnown RBP10.63□□□□□ -0.71
ABCF3-205ENST00000466416 WEE2P0C1S8 567 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 ARP10275 920 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 INSRRP14616 1297 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 IBSPP21815 317 aaPredicted RBP10.63□□□□□ -0.71
ABCF3-205ENST00000466416 ATXN1P54253 815 aaKnown RBP10.63□□□□□ -0.71
ABCF3-205ENST00000466416 HAND2P61296 217 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 IGBP1P78318 339 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 FAM189BP81408 668 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 ARHGAP8P85298 464 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 NFX1Q12986 1120 aaKnown RBP10.63□□□□□ -0.71
ABCF3-205ENST00000466416 XRRA1Q6P2D8 792 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 KCNT2Q6UVM3 1135 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 NLRX1Q86UT6 975 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 GLG1Q92896 1179 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 ZNF558Q96NG5 402 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 ADAM2Q99965 735 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 ELAC1Q9H777 363 aaKnown RBP10.63□□□□□ -0.71
ABCF3-205ENST00000466416 KCNK12Q9HB15 430 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 SPG21Q9NZD8 308 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 IGSF9Q9P2J2 1179 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 TELO2Q9Y4R8 837 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 PCDHA2Q9Y5H9 948 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 CHD6Q8TD26 2715 aa10.63□□□□□ -0.71
ABCF3-205ENST00000466416 FRMPD4Q14CM0 1322 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 ATRXP46100 2492 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 MAP1BP46821 2468 aaKnown RBP10.62□□□□□ -0.71
ABCF3-205ENST00000466416 SMIM35A0A1B0GVV1 85 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 GSTTP1A0A1W2PQM5 241 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 KLRF2D3W0D1 207 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 HOXA2O43364 376 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 PPP1R11O60927 126 aaPredicted RBP10.62□□□□□ -0.71
ABCF3-205ENST00000466416 SP9P0CG40 484 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 RFX1P22670 979 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 MARK3P27448 753 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 PDE4AP27815 886 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 KRT76Q01546 638 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 TMEM62Q0P6H9 643 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 NONOQ15233 471 aaKnown RBP eCLIP10.62□□□□□ -0.71
ABCF3-205ENST00000466416 MCMDC2Q4G0Z9 681 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 TICAM2Q86XR7 235 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 SUMF1Q8NBK3 374 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 RIN2Q8WYP3 895 aaPredicted RBP10.62□□□□□ -0.71
ABCF3-205ENST00000466416 ZSCAN10Q96SZ4 725 aaPredicted RBP10.62□□□□□ -0.71
ABCF3-205ENST00000466416 TMEM117Q9H0C3 514 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 TMEM161AQ9NX61 479 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 HCSTQ9UBK5 93 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 ZFHX4Q86UP3 3567 aa10.62□□□□□ -0.71
ABCF3-205ENST00000466416 GPR179Q6PRD1 2367 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 GPR182O15218 404 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 MGEA5O60502 916 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 KINO60870 393 aaKnown RBP10.61□□□□□ -0.71
ABCF3-205ENST00000466416 RPS6KA5O75582 802 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 CXCL14O95715 111 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 TMEM266Q2M3C6 531 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
ABCF3-205ENST00000466416 PCNX4Q63HM2 1172 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 CCDC149Q6ZUS6 474 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 TBC1D10CQ8IV04 446 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 C1orf210Q8IVY1 113 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 STAG2Q8N3U4 1231 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 C12orf76Q8N812 135 aaPredicted RBP10.61□□□□□ -0.71
ABCF3-205ENST00000466416 TMEM87AQ8NBN3 555 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 CHAMP1Q96JM3 812 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 CDHR1Q96JP9 859 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 RTKNQ9BST9 563 aa10.61□□□□□ -0.71
ABCF3-205ENST00000466416 MYH6P13533 1939 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 FNDC1Q4ZHG4 1894 aaPredicted RBP10.6□□□□□ -0.71
ABCF3-205ENST00000466416 KRBA1A5PL33 1030 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 ADRB1P08588 477 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 FGFR1P11362 822 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 LMNB2Q03252 620 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 GIT2Q14161 759 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 PHLDB3Q6NSJ2 640 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 LRRC55Q6ZSA7 311 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 GPR149Q86SP6 731 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 ENAHQ8N8S7 591 aaPredicted RBP10.6□□□□□ -0.71
ABCF3-205ENST00000466416 SECISBP2LQ93073 1101 aaKnown RBP10.6□□□□□ -0.71
ABCF3-205ENST00000466416 EVI5LQ96CN4 794 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 GPRASP2Q96D09 838 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 CASD1Q96PB1 797 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 NCDNQ9UBB6 729 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 CDV3Q9UKY7 258 aaKnown RBP10.6□□□□□ -0.71
ABCF3-205ENST00000466416 ST3GAL5Q9UNP4 418 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 SIT1Q9Y3P8 196 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 NOC2LQ9Y3T9 749 aaKnown RBP10.6□□□□□ -0.71
ABCF3-205ENST00000466416 IRAK3Q9Y616 596 aa10.6□□□□□ -0.71
ABCF3-205ENST00000466416 NEDD4P46934 1319 aa10.59□□□□□ -0.71
ABCF3-205ENST00000466416 PNMA6FA0A0J9YX94 578 aa10.59□□□□□ -0.71
ABCF3-205ENST00000466416 ZNF213O14771 459 aa10.59□□□□□ -0.71
ABCF3-205ENST00000466416 SPTLC1O15269 473 aa10.59□□□□□ -0.71
ABCF3-205ENST00000466416 ATP9AO75110 1047 aa10.59□□□□□ -0.71
ABCF3-205ENST00000466416 CFHP08603 1231 aa10.59□□□□□ -0.71
ABCF3-205ENST00000466416 KCNA2P16389 499 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms