RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 KCNB2Q92953 911 aa23.44■■□□□ 1.34
COL6A1-203ENST00000466285 LENG9Q96B70 501 aa23.44■■□□□ 1.34
COL6A1-203ENST00000466285 IGFLR1Q9H665 355 aa23.44■■□□□ 1.34
COL6A1-203ENST00000466285 IPO5O00410 1097 aaKnown RBP23.43■■□□□ 1.34
COL6A1-203ENST00000466285 C22orf31O95567 290 aa23.43■■□□□ 1.34
COL6A1-203ENST00000466285 ZNF76P36508 570 aa23.43■■□□□ 1.34
COL6A1-203ENST00000466285 SWSAP1Q6NVH7 229 aa23.43■■□□□ 1.34
COL6A1-203ENST00000466285 NIPA1Q7RTP0 329 aa23.43■■□□□ 1.34
COL6A1-203ENST00000466285 KLHL23Q8NBE8 558 aa23.43■■□□□ 1.34
COL6A1-203ENST00000466285 LMAN2LQ9H0V9 348 aa23.43■■□□□ 1.34
COL6A1-203ENST00000466285 ZNF302Q9NR11 478 aa23.43■■□□□ 1.34
COL6A1-203ENST00000466285 SQORQ9Y6N5 450 aa23.43■■□□□ 1.34
COL6A1-203ENST00000466285 M0QZ92 97 aa23.42■■□□□ 1.34
COL6A1-203ENST00000466285 RBM10P98175 930 aaKnown RBP23.42■■□□□ 1.34
COL6A1-203ENST00000466285 NFX1Q12986 1120 aaKnown RBP23.42■■□□□ 1.34
COL6A1-203ENST00000466285 PDXDC2PQ6P474 469 aa23.42■■□□□ 1.34
COL6A1-203ENST00000466285 SPPL3Q8TCT6 385 aa23.42■■□□□ 1.34
COL6A1-203ENST00000466285 GJA10Q969M2 543 aa23.42■■□□□ 1.34
COL6A1-203ENST00000466285 OSMRQ99650 979 aa23.42■■□□□ 1.34
COL6A1-203ENST00000466285 ZMYND12Q9H0C1 365 aa23.42■■□□□ 1.34
COL6A1-203ENST00000466285 RWDD3Q9Y3V2 267 aa23.42■■□□□ 1.34
COL6A1-203ENST00000466285 MUC6Q6W4X9 2439 aa23.42■■□□□ 1.34
COL6A1-203ENST00000466285 WDFY4Q6ZS81 3184 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 ESYT2A0FGR8 921 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 MBTPS2O43462 519 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 VTNP04004 478 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 CYP3A4P08684 503 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 RCAN1P53805 252 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 NTRK3Q16288 839 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 KIZQ2M2Z5 673 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 FAM228AQ86W67 206 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 FAM122AQ96E09 287 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 ZNF577Q9BSK1 485 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 FTHL17Q9BXU8 183 aa23.41■■□□□ 1.34
COL6A1-203ENST00000466285 NCOA5Q9HCD5 579 aaKnown RBP23.41■■□□□ 1.34
COL6A1-203ENST00000466285 COL1A2P08123 1366 aa23.4■■□□□ 1.34
COL6A1-203ENST00000466285 C19orf67A6NJJ6 358 aa23.4■■□□□ 1.34
COL6A1-203ENST00000466285 HBP1O60381 514 aa23.4■■□□□ 1.34
COL6A1-203ENST00000466285 GLP2RO95838 553 aa23.4■■□□□ 1.34
COL6A1-203ENST00000466285 HSPA4P34932 840 aa23.4■■□□□ 1.34
COL6A1-203ENST00000466285 KRT32Q14532 448 aa23.4■■□□□ 1.34
COL6A1-203ENST00000466285 UGCGQ16739 394 aa23.4■■□□□ 1.34
COL6A1-203ENST00000466285 FAM102BQ5T8I3 360 aa23.4■■□□□ 1.34
COL6A1-203ENST00000466285 REXO1Q8N1G1 1221 aaKnown RBP23.4■■□□□ 1.34
COL6A1-203ENST00000466285 ZNF668Q96K58 619 aaPredicted RBP23.4■■□□□ 1.34
COL6A1-203ENST00000466285 PLVAPQ9BX97 442 aa23.4■■□□□ 1.34
COL6A1-203ENST00000466285 SARSP49591 514 aaKnown RBP23.39■■□□□ 1.33
COL6A1-203ENST00000466285 SLC26A2P50443 739 aa23.39■■□□□ 1.33
COL6A1-203ENST00000466285 CLCN3P51790 818 aa23.39■■□□□ 1.33
COL6A1-203ENST00000466285 PRR16Q569H4 304 aa23.39■■□□□ 1.33
COL6A1-203ENST00000466285 FAM160B1Q5W0V3 765 aa23.39■■□□□ 1.33
COL6A1-203ENST00000466285 MIS18BP1Q6P0N0 1132 aa23.39■■□□□ 1.33
COL6A1-203ENST00000466285 POF1BQ8WVV4 589 aa23.39■■□□□ 1.33
COL6A1-203ENST00000466285 P2RX5Q93086 422 aa23.39■■□□□ 1.33
COL6A1-203ENST00000466285 ADAM2Q99965 735 aa23.39■■□□□ 1.33
COL6A1-203ENST00000466285 CLEC1BQ9P126 229 aa23.39■■□□□ 1.33
COL6A1-203ENST00000466285 VPS54Q9P1Q0 977 aa23.39■■□□□ 1.33
COL6A1-203ENST00000466285 ST3GAL5Q9UNP4 418 aa23.39■■□□□ 1.33
COL6A1-203ENST00000466285 C9IYK1 514 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 ZNF862O60290 1169 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 GPR32O75388 356 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 RPS6KA5O75582 802 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 RPLP2P05387 115 aaKnown RBP23.38■■□□□ 1.33
COL6A1-203ENST00000466285 FGFR1P11362 822 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 RPS6KB1P23443 525 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 SMAD2Q15796 467 aaKnown RBP23.38■■□□□ 1.33
COL6A1-203ENST00000466285 PUS10Q3MIT2 529 aaKnown RBP23.38■■□□□ 1.33
COL6A1-203ENST00000466285 TEX2Q8IWB9 1127 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 ADHFE1Q8IWW8 467 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 MSLNLQ96KJ4 702 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 AGXT2Q9BYV1 514 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 RNF19AQ9NV58 838 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 MAFBQ9Y5Q3 323 aaPredicted RBP23.38■■□□□ 1.33
COL6A1-203ENST00000466285 ZNF318Q5VUA4 2279 aa23.38■■□□□ 1.33
COL6A1-203ENST00000466285 PRPF3O43395 683 aaKnown RBP23.37■■□□□ 1.33
COL6A1-203ENST00000466285 FGD1P98174 961 aa23.37■■□□□ 1.33
COL6A1-203ENST00000466285 ADAM15Q13444 863 aa23.37■■□□□ 1.33
COL6A1-203ENST00000466285 ZNF484Q5JVG2 852 aa23.37■■□□□ 1.33
COL6A1-203ENST00000466285 RBM23Q86U06 439 aaKnown RBP23.37■■□□□ 1.33
COL6A1-203ENST00000466285 NME8Q8N427 588 aa23.37■■□□□ 1.33
COL6A1-203ENST00000466285 LRRC71Q8N4P6 559 aa23.37■■□□□ 1.33
COL6A1-203ENST00000466285 LINC01465Q8N7H1 131 aa23.37■■□□□ 1.33
COL6A1-203ENST00000466285 VN1R2Q8NFZ6 395 aa23.37■■□□□ 1.33
COL6A1-203ENST00000466285 GABBR1Q9UBS5 961 aa23.37■■□□□ 1.33
COL6A1-203ENST00000466285 BARX2Q9UMQ3 279 aaPredicted RBP23.37■■□□□ 1.33
COL6A1-203ENST00000466285 HCN4Q9Y3Q4 1203 aa23.37■■□□□ 1.33
COL6A1-203ENST00000466285 TECTAO75443 2155 aa23.37■■□□□ 1.33
COL6A1-203ENST00000466285 TBKBP1A7MCY6 615 aa23.36■■□□□ 1.33
COL6A1-203ENST00000466285 NRIP1P48552 1158 aa23.36■■□□□ 1.33
COL6A1-203ENST00000466285 CCT2P78371 535 aaKnown RBP23.36■■□□□ 1.33
COL6A1-203ENST00000466285 DSC3Q14574 896 aa23.36■■□□□ 1.33
COL6A1-203ENST00000466285 ZNF746Q6NUN9 644 aaPredicted RBP23.36■■□□□ 1.33
COL6A1-203ENST00000466285 BLOC1S2Q6QNY1 142 aa23.36■■□□□ 1.33
COL6A1-203ENST00000466285 CKAP2LQ8IYA6 745 aa23.36■■□□□ 1.33
COL6A1-203ENST00000466285 SLC26A6Q9BXS9 759 aa23.36■■□□□ 1.33
COL6A1-203ENST00000466285 GLT8D2Q9H1C3 349 aa23.36■■□□□ 1.33
COL6A1-203ENST00000466285 C6orf50Q9HD87 102 aa23.36■■□□□ 1.33
COL6A1-203ENST00000466285 RGS18Q9NS28 235 aa23.36■■□□□ 1.33
COL6A1-203ENST00000466285 LRFN2Q9ULH4 789 aa23.36■■□□□ 1.33
COL6A1-203ENST00000466285 MSH4O15457 936 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms