RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SH2D3AQ9BRG2 576 aa10.97□□□□□ -0.65
RTFDC1-205ENST00000466260 SMC3Q9UQE7 1217 aa10.97□□□□□ -0.65
RTFDC1-205ENST00000466260 GINS2Q9Y248 185 aa10.97□□□□□ -0.65
RTFDC1-205ENST00000466260 CDY2AQ9Y6F7 541 aa10.97□□□□□ -0.65
RTFDC1-205ENST00000466260 IGSF9BQ9UPX0 1349 aa10.97□□□□□ -0.65
RTFDC1-205ENST00000466260 NLRC5Q86WI3 1866 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 TMEM150BA6NC51 233 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 EML1O00423 815 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 ZNF862O60290 1169 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 NEMFO60524 1076 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 OATP04181 439 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 GHRP10912 638 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 IBSPP21815 317 aaPredicted RBP10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 DNAJB2P25686 324 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 KLRC1P26715 233 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 SFNP31947 248 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 MCM2P49736 904 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 SLC26A2P50443 739 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 SMAD3P84022 425 aaKnown RBP10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 NBR1Q14596 966 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 GPNMBQ14956 572 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 CALCRLQ16602 461 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 MTERF2Q49AM1 385 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 MCTP1Q6DN14 999 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 PPP4R3AQ6IN85 833 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 FAM117BQ6P1L5 589 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 TAF2Q6P1X5 1199 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 CNKSR3Q6P9H4 555 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 MTHFD1LQ6UB35 978 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 RSPH3Q86UC2 560 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 DBF4BQ8NFT6 615 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 PBX4Q9BYU1 374 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 NKX2-4Q9H2Z4 354 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 KCNMB3Q9NPA1 279 aa10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 MAFBQ9Y5Q3 323 aaPredicted RBP10.96□□□□□ -0.65
RTFDC1-205ENST00000466260 SZT2Q5T011 3432 aa10.96□□□□□ -0.66
RTFDC1-205ENST00000466260 COL4A4P53420 1690 aaPredicted RBP10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 COL1A2P08123 1366 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 H3BQV1 296 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 M0QZ92 97 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 BAG4O95429 457 aaKnown RBP10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 MYOGP15173 224 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 ATP2A2P16615 1042 aaKnown RBP10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 TXKP42681 527 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 WDR5P61964 334 aaKnown RBP10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 DEFB103AP81534 67 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 MRPS6P82932 125 aaKnown RBP10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 ZNF174Q15697 407 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 RASIP1Q5U651 963 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 LRRC71Q8N4P6 559 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 METTL13Q8N6R0 699 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 FBXO22Q8NEZ5 403 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 FBXO18Q8NFZ0 1043 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 HAS1Q92839 578 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 ZNF668Q96K58 619 aaPredicted RBP10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 VAV3Q9UKW4 847 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 KIF3AQ9Y496 699 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 TRPV2Q9Y5S1 764 aa10.95□□□□□ -0.66
RTFDC1-205ENST00000466260 MYH15Q9Y2K3 1946 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 MBLAC1A4D2B0 266 aaPredicted RBP10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 SLC34A2O95436 690 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 PARNO95453 639 aaKnown RBP10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 CHRNA1P02708 482 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 CXCL10P02778 98 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 VTNP04004 478 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 CLCN3P51790 818 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 CYP4A11Q02928 519 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 MGAT3Q09327 533 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 PPP2R5CQ13362 524 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 IKBKEQ14164 716 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 ZNF484Q5JVG2 852 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 TTC38Q5R3I4 469 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 PLA2G4FQ68DD2 849 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 ASTLQ6HA08 431 aaPredicted RBP10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 MYOCDQ8IZQ8 938 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 TIFAQ96CG3 184 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 DYDC2Q96IM9 177 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 FAM167AQ96KS9 214 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 FAM20AQ96MK3 541 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 SLC9A7Q96T83 725 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 ZBED2Q9BTP6 218 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 IFIH1Q9BYX4 1025 aaKnown RBP10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 TMEM60Q9H2L4 133 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 MSRAQ9UJ68 235 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 NOL7Q9UMY1 257 aaKnown RBP10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 CEP131Q9UPN4 1083 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 YBX2Q9Y2T7 364 aaKnown RBP10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 PCDHA2Q9Y5H9 948 aa10.94□□□□□ -0.66
RTFDC1-205ENST00000466260 SMIM35A0A1B0GVV1 85 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 POTEMA6NI47 508 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 DDX11L8A8MPP1 907 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 ZBTB42B2RXF5 422 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 TBX3O15119 743 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 CAND2O75155 1236 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 BAIAP3O94812 1187 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 UPP2O95045 317 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 C22orf31O95567 290 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 CTTNQ14247 550 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms